Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-562
Cow position:
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 109

Conread position: 1-574
Cow position:
Alignm length: 606
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 1-575
Cow position:
Alignm length: 600
Alignm identity: 387
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 99

Conread position: 1-577
Cow position:
Alignm length: 596
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 99

Conread position: 26-577
Cow position:
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 29-393
Cow position:
Alignm length: 374
Alignm identity: 247
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 66

Conread position: 49-562
Cow position:
Alignm length: 531
Alignm identity: 347
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 123, 51

Conread position: 49-574
Cow position:
Alignm length: 553
Alignm identity: 364
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 152, 52

Conread position: 49-577
Cow position:
Alignm length: 556
Alignm identity: 368
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 14

Conread position: 50-546
Cow position:
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 50-562
Cow position:
Alignm length: 528
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 37

Conread position: 50-562
Cow position:
Alignm length: 523
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 52

Conread position: 50-574
Cow position:
Alignm length: 549
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 50-574
Cow position:
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 7

Conread position: 50-574
Cow position:
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 50-574
Cow position:
Alignm length: 546
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 33

Conread position: 50-574
Cow position:
Alignm length: 548
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 16

Conread position: 50-575
Cow position:
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 52-545
Cow position:
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 47

Conread position: 54-545
Cow position:
Alignm length: 503
Alignm identity: 311
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 20

Conread position: 56-248
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 159, 38

Conread position: 56-476
Cow position:
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 47

Conread position: 56-530
Cow position:
Alignm length: 498
Alignm identity: 331
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 297

Conread position: 56-560
Cow position:
Alignm length: 525
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 44

Conread position: 56-562
Cow position:
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 47

Conread position: 56-562
Cow position:
Alignm length: 530
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 44

Conread position: 56-562
Cow position:
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 44

Conread position: 56-572
Cow position:
Alignm length: 540
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 538
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 56-574
Cow position:
Alignm length: 538
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 44

Conread position: 56-576
Cow position:
Alignm length: 544
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 57-562
Cow position:
Alignm length: 527
Alignm identity: 346
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 125, 43

Conread position: 57-562
Cow position:
Alignm length: 528
Alignm identity: 346
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 43

Conread position: 57-574
Cow position:
Alignm length: 537
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 43

Conread position: 57-574
Cow position:
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 86

Conread position: 57-577
Cow position:
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 43

Conread position: 57-577
Cow position:
Alignm length: 542
Alignm identity: 354
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 44

Conread position: 57-577
Cow position:
Alignm length: 530
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 93

Conread position: 58-577
Cow position:
Alignm length: 545
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 120

Conread position: 76-559
Cow position:
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 82-574
Cow position:
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 18

Conread position: 84-545
Cow position:
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 18

Conread position: 84-562
Cow position:
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 84-574
Cow position:
Alignm length: 517
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 89-248
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 89

Conread position: 97-577
Cow position:
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 63

Conread position: 104-574
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 269

Conread position: 104-577
Cow position:
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 120-513
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 60

Conread position: 124-577
Cow position:
Alignm length: 478
Alignm identity: 314
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 250

Conread position: 127-556
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 180-560
Cow position:
Alignm length: 382
Alignm identity: 224
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 212, 73

Conread position: 235-562
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 118

Conread position: 235-563
Cow position:
Alignm length: 330
Alignm identity: 210
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 126, 17

Conread position: 238-562
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 49

Conread position: 238-562
Cow position:
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 238-574
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 115

Conread position: 238-577
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 24

Conread position: 238-577
Cow position:
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 115

Conread position: 244-574
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 110

Conread position: 244-577
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 46

Conread position: 246-561
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 7

Conread position: 246-562
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 131, 7

Conread position: 246-575
Cow position:
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 113

Conread position: 247-574
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 105

Conread position: 247-574
Cow position:
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 247-574
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 249-577
Cow position:
Alignm length: 334
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 64

Conread position: 252-574
Cow position:
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 25

Conread position: 253-540
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 114, 29

Conread position: 254-571
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 64

Conread position: 255-562
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 97

Conread position: 255-575
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 140

Conread position: 291-555
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 7, 65

Conread position: 297-577
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 91

Conread position: 305-477
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 47

Conread position: 321-562
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 31

Conread position: 328-574
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 154

Conread position: 331-577
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 21

Conread position: 336-577
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 16

Conread position: 344-575
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 124

Conread position: 372-577
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 102

Conread position: 375-577
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 379-571
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 32

Conread position: 386-576
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 389-574
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 399-577
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 40

Conread position: 400-574
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.