Cow genome map


           Conread name:
           rret28_b20.y1
        

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               394
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               1-577
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               2-575
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 387
               

               Conread position:
               5-577
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               29-562
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               29-574
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 71
               

               Conread position:
               49-557
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 24
               

               Conread position:
               49-562
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 45
               

               Conread position:
               49-574
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 51
               

               Conread position:
               49-574
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 53
               

               Conread position:
               50-246
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               50-575
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               355
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               132, 50
               

               Conread position:
               56-526
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               56-561
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               56-577
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 44
               

               Conread position:
               56-577
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               335
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               57-562
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               57-562
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               58-562
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 119
               

               Conread position:
               62-574
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 38
               

               Conread position:
               77-574
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 23
               

               Conread position:
               84-562
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 18
               

               Conread position:
               95-539
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               303
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               98, 73
               

               Conread position:
               99-577
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 16
               

               Conread position:
               118-574
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               127-576
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               138-577
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               235-562
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 241
               

               Conread position:
               238-562
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               239-477
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               128, 116
               

               Conread position:
               244-571
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               244-574
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               244-574
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               244-576
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               244-577
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               246-577
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               103, 165
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               252-577
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               259-562
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               108, 36
               

               Conread position:
               259-576
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               291-562
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               295-574
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               72, 180
               

               Conread position:
               305-561
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               312-574
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               313-574
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               325-577
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               331-575
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 66
               

               Conread position:
               355-577
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               363-562
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               370-570
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               371-577
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 101
               

               Conread position:
               402-574
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               406-576
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.