Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 3-559 |
| Cow position: | chr12:18465334-18465858 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 363 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 26-562 |
| Cow position: | chr12:21482551-21483077 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 352 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 29-561 |
| Cow position: | chr12:21253137-21252585 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 50-506 |
| Cow position: | chr12:24433608-24433139 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 50-554 |
| Cow position: | chr12:21092250-21091745 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 50-574 |
| Cow position: | chr12:17967288-17967815 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 50-574 |
| Cow position: | chr12:42858059-42857525 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 50-577 |
| Cow position: | chr12:29445207-29445739 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 52-574 |
| Cow position: | chr12:27854488-27853953 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 54-574 |
| Cow position: | chr12:30685222-30685747 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 16 |
| Conread position: | 56-561 |
| Cow position: | chr12:20461749-20461234 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 56-574 |
| Cow position: | chr12:21429489-21430020 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 56-574 |
| Cow position: | chr12:42606770-42606240 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 44 |
| Conread position: | 65-577 |
| Cow position: | chr12:23161419-23160901 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 5 |
| Conread position: | 93-577 |
| Cow position: | chr12:8554364-8554866 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 324 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 94-562 |
| Cow position: | chr12:39796215-39795743 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 312 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 57, 83 |
| Conread position: | 100-561 |
| Cow position: | chr12:21310715-21310248 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 129-574 |
| Cow position: | chr12:21428040-21427581 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 135-554 |
| Cow position: | chr12:43054896-43054479 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 249-577 |
| Cow position: | chr12:23101372-23101054 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 56 |
| Conread position: | 259-577 |
| Cow position: | chr12:25095844-25095533 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 283-574 |
| Cow position: | chr12:23258015-23257739 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 208, 82 |
| Conread position: | 312-574 |
| Cow position: | chr12:23139423-23139163 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 388-574 |
| Cow position: | chr12:24994152-24993970 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.