Cow genome map

Conread name: rret28_b20.y1

Conread position: 27-577
Cow position:
Alignm length: 572
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 18

Conread position: 29-182
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 29-561
Cow position:
Alignm length: 559
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 49-552
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 45

Conread position: 49-576
Cow position:
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 51

Conread position: 49-577
Cow position:
Alignm length: 552
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 136

Conread position: 50-574
Cow position:
Alignm length: 549
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 50-574
Cow position:
Alignm length: 548
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 50-574
Cow position:
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 22

Conread position: 51-577
Cow position:
Alignm length: 537
Alignm identity: 345
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 94, 25

Conread position: 54-577
Cow position:
Alignm length: 547
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 12

Conread position: 56-562
Cow position:
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 56-564
Cow position:
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 531
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 58-574
Cow position:
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 42

Conread position: 79-525
Cow position:
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 25

Conread position: 80-571
Cow position:
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 20

Conread position: 83-545
Cow position:
Alignm length: 483
Alignm identity: 315
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 19

Conread position: 83-571
Cow position:
Alignm length: 520
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 40

Conread position: 84-574
Cow position:
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 92-562
Cow position:
Alignm length: 489
Alignm identity: 316
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 16

Conread position: 93-562
Cow position:
Alignm length: 485
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 193

Conread position: 115-544
Cow position:
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 64

Conread position: 235-562
Cow position:
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 118

Conread position: 238-554
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 127, 15

Conread position: 238-574
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 115

Conread position: 244-574
Cow position:
Alignm length: 342
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 82

Conread position: 247-574
Cow position:
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 253-561
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 60

Conread position: 254-532
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 114, 60

Conread position: 254-562
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 113, 23

Conread position: 264-542
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 103, 38

Conread position: 270-554
Cow position:
Alignm length: 288
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 85

Conread position: 270-562
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 82

Conread position: 271-562
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 42

Conread position: 297-562
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 58

Conread position: 325-574
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 149, 0

Conread position: 337-577
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 15

Conread position: 343-562
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 136

Conread position: 376-561
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 87

Conread position: 376-574
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 98, 0

Show alignments to all cow chromosomes.