Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 27-577 |
| Cow position: | chr13:34049951-34050497 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 18 |
| Conread position: | 29-182 |
| Cow position: | chr13:62024730-62024580 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 29-561 |
| Cow position: | chr13:13901095-13901643 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 49-552 |
| Cow position: | chr13:14177600-14177097 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 45 |
| Conread position: | 49-576 |
| Cow position: | chr13:728483-729023 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 49-577 |
| Cow position: | chr13:49494926-49494384 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 136 |
| Conread position: | 50-574 |
| Cow position: | chr13:5500742-5500206 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 50-574 |
| Cow position: | chr13:33335058-33334530 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 50-574 |
| Cow position: | chr13:43590577-43591102 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 22 |
| Conread position: | 51-577 |
| Cow position: | chr13:34019482-34018969 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 345 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 54-577 |
| Cow position: | chr13:34030863-34031387 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 56-562 |
| Cow position: | chr13:6358385-6358903 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 56-564 |
| Cow position: | chr13:33524695-33524177 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 56-574 |
| Cow position: | chr13:13326188-13326712 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 56-574 |
| Cow position: | chr13:15449892-15449381 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 56-574 |
| Cow position: | chr13:16253255-16252727 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 58-574 |
| Cow position: | chr13:6666876-6666347 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 79-525 |
| Cow position: | chr13:31729617-31729163 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 25 |
| Conread position: | 80-571 |
| Cow position: | chr13:34938723-34939224 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 83-545 |
| Cow position: | chr13:7725157-7724689 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 83-571 |
| Cow position: | chr13:22184053-22183544 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 84-574 |
| Cow position: | chr13:30304486-30304988 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 92-562 |
| Cow position: | chr13:47568436-47568901 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 93-562 |
| Cow position: | chr13:34087766-34088242 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 193 |
| Conread position: | 115-544 |
| Cow position: | chr13:32547824-32548249 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 235-562 |
| Cow position: | chr13:15923002-15922678 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 118 |
| Conread position: | 238-554 |
| Cow position: | chr13:11246675-11246381 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 238-574 |
| Cow position: | chr13:50110917-50111251 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 115 |
| Conread position: | 244-574 |
| Cow position: | chr13:53553062-53552736 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 247-574 |
| Cow position: | chr13:3760160-3759837 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 253-561 |
| Cow position: | chr13:14523660-14523372 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 114, 60 |
| Conread position: | 254-532 |
| Cow position: | chr13:21907706-21907428 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 60 |
| Conread position: | 254-562 |
| Cow position: | chr13:57025329-57025631 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 264-542 |
| Cow position: | chr13:28095697-28095427 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 270-554 |
| Cow position: | chr13:56833545-56833819 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 270-562 |
| Cow position: | chr13:34096462-34096178 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 97, 82 |
| Conread position: | 271-562 |
| Cow position: | chr13:61084411-61084695 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 297-562 |
| Cow position: | chr13:15558859-15559120 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 325-574 |
| Cow position: | chr13:59979715-59979470 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 337-577 |
| Cow position: | chr13:60650266-60650512 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 343-562 |
| Cow position: | chr13:3652695-3652475 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 376-561 |
| Cow position: | chr13:17330233-17330049 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 376-574 |
| Cow position: | chr13:17310014-17310208 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.