Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-574
Cow position: chr14:11476221-11475626 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 2-562
Cow position: chr14:5075020-5075591 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 30-576
Cow position: chr14:29581256-29581785 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 345
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 15

Conread position: 32-531
Cow position: chr14:16342787-16342277 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 23

Conread position: 35-577
Cow position: chr14:20564526-20564010 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 346
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 64

Conread position: 48-523
Cow position: chr14:47643418-47643903 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 324
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 151, 46

Conread position: 49-574
Cow position: chr14:17490209-17489673 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 51

Conread position: 50-525
Cow position: chr14:35372085-35371618 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 313
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 23

Conread position: 50-574
Cow position: chr14:30595220-30594687 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 54-575
Cow position: chr14:30761751-30761245 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 343
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 93

Conread position: 56-246
Cow position: chr14:38814357-38814162 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 38

Conread position: 56-562
Cow position: chr14:13780088-13780604 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-562
Cow position: chr14:44552975-44553483 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 46

Conread position: 56-574
Cow position: chr14:1659591-1660125 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 44

Conread position: 56-574
Cow position: chr14:29046536-29046012 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-577
Cow position: chr14:34861760-34862291 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 125

Conread position: 57-574
Cow position: chr14:23256224-23255693 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 43

Conread position: 57-575
Cow position: chr14:29223947-29223406 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 364
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 115, 36

Conread position: 67-577
Cow position: chr14:34998269-34998786 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 71-558
Cow position: chr14:48148723-48148250 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 326
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 132, 30

Conread position: 80-577
Cow position: chr14:2295430-2295938 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 20

Conread position: 84-562
Cow position: chr14:13304117-13304611 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 85-577
Cow position: chr14:33490001-33490501 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 59

Conread position: 93-562
Cow position: chr14:19461109-19460639 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 106-574
Cow position: chr14:46390444-46389967 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 109

Conread position: 112-574
Cow position: chr14:33392734-33392257 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 103

Conread position: 115-575
Cow position: chr14:42122383-42121914 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 62

Conread position: 192-577
Cow position: chr14:38814184-38813813 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 7

Conread position: 197-577
Cow position: chr14:22361301-22361665 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 36

Conread position: 238-562
Cow position: chr14:191384-191704 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 115

Conread position: 238-575
Cow position: chr14:30704809-30704479 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 72

Conread position: 247-562
Cow position: chr14:8413273-8413571 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 244, 12

Conread position: 247-574
Cow position: chr14:46503045-46503356 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 32, 106

Conread position: 259-571
Cow position: chr14:31391757-31391455 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 90, 11

Conread position: 259-577
Cow position: chr14:14667769-14667459 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 207
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 86

Conread position: 283-577
Cow position: chr14:16201791-16201506 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 69

Conread position: 317-574
Cow position: chr14:30582707-30582455 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 35

Conread position: 325-577
Cow position: chr14:9513693-9513444 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 156

Conread position: 343-574
Cow position: chr14:17688288-17688513 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 83

Conread position: 351-574
Cow position: chr14:46221524-46221744 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 124

Conread position: 370-574
Cow position: chr14:36908737-36908538 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 121, 104

Show alignments to all cow chromosomes.