Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 1-574 |
| Cow position: | chr14:11476221-11475626 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 111 |
| Conread position: | 2-562 |
| Cow position: | chr14:5075020-5075591 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 30-576 |
| Cow position: | chr14:29581256-29581785 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 32-531 |
| Cow position: | chr14:16342787-16342277 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 35-577 |
| Cow position: | chr14:20564526-20564010 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 346 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 48-523 |
| Cow position: | chr14:47643418-47643903 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 151, 46 |
| Conread position: | 49-574 |
| Cow position: | chr14:17490209-17489673 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 50-525 |
| Cow position: | chr14:35372085-35371618 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 50-574 |
| Cow position: | chr14:30595220-30594687 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 54-575 |
| Cow position: | chr14:30761751-30761245 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 343 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 56-246 |
| Cow position: | chr14:38814357-38814162 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 56-562 |
| Cow position: | chr14:13780088-13780604 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 56-562 |
| Cow position: | chr14:44552975-44553483 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 46 |
| Conread position: | 56-574 |
| Cow position: | chr14:1659591-1660125 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 44 |
| Conread position: | 56-574 |
| Cow position: | chr14:29046536-29046012 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 56-577 |
| Cow position: | chr14:34861760-34862291 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 57-574 |
| Cow position: | chr14:23256224-23255693 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 57-575 |
| Cow position: | chr14:29223947-29223406 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 364 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 67-577 |
| Cow position: | chr14:34998269-34998786 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 71-558 |
| Cow position: | chr14:48148723-48148250 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 326 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 80-577 |
| Cow position: | chr14:2295430-2295938 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 84-562 |
| Cow position: | chr14:13304117-13304611 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 85-577 |
| Cow position: | chr14:33490001-33490501 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 93-562 |
| Cow position: | chr14:19461109-19460639 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 136 |
| Conread position: | 106-574 |
| Cow position: | chr14:46390444-46389967 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 112-574 |
| Cow position: | chr14:33392734-33392257 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 115-575 |
| Cow position: | chr14:42122383-42121914 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 192-577 |
| Cow position: | chr14:38814184-38813813 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 197-577 |
| Cow position: | chr14:22361301-22361665 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 238-562 |
| Cow position: | chr14:191384-191704 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 238-575 |
| Cow position: | chr14:30704809-30704479 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 72 |
| Conread position: | 247-562 |
| Cow position: | chr14:8413273-8413571 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 244, 12 |
| Conread position: | 247-574 |
| Cow position: | chr14:46503045-46503356 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 259-571 |
| Cow position: | chr14:31391757-31391455 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 259-577 |
| Cow position: | chr14:14667769-14667459 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 283-577 |
| Cow position: | chr14:16201791-16201506 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 69 |
| Conread position: | 317-574 |
| Cow position: | chr14:30582707-30582455 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 325-577 |
| Cow position: | chr14:9513693-9513444 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 156 |
| Conread position: | 343-574 |
| Cow position: | chr14:17688288-17688513 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 351-574 |
| Cow position: | chr14:46221524-46221744 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 370-574 |
| Cow position: | chr14:36908737-36908538 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 121, 104 |
Show alignments to all cow chromosomes.