Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-577
Cow position:
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 37-575
Cow position:
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 49-577
Cow position:
Alignm length: 549
Alignm identity: 359
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 51

Conread position: 50-439
Cow position:
Alignm length: 412
Alignm identity: 243
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 29

Conread position: 50-561
Cow position:
Alignm length: 536
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 50-562
Cow position:
Alignm length: 536
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 34

Conread position: 50-562
Cow position:
Alignm length: 535
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 50-574
Cow position:
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 34

Conread position: 50-574
Cow position:
Alignm length: 548
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 50-574
Cow position:
Alignm length: 551
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 30

Conread position: 50-574
Cow position:
Alignm length: 547
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 23

Conread position: 50-576
Cow position:
Alignm length: 548
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 50-576
Cow position:
Alignm length: 550
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 54-245
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 24

Conread position: 54-574
Cow position:
Alignm length: 537
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 19

Conread position: 56-470
Cow position:
Alignm length: 436
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 43

Conread position: 56-562
Cow position:
Alignm length: 536
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-570
Cow position:
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 56-574
Cow position:
Alignm length: 543
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 44

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 57-554
Cow position:
Alignm length: 500
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 45

Conread position: 57-562
Cow position:
Alignm length: 527
Alignm identity: 348
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 144, 43

Conread position: 57-562
Cow position:
Alignm length: 512
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 43

Conread position: 57-562
Cow position:
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 74-562
Cow position:
Alignm length: 496
Alignm identity: 310
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 13

Conread position: 82-477
Cow position:
Alignm length: 425
Alignm identity: 292
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 18

Conread position: 82-574
Cow position:
Alignm length: 517
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 84-562
Cow position:
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 84-574
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 95

Conread position: 84-574
Cow position:
Alignm length: 515
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 18

Conread position: 85-574
Cow position:
Alignm length: 514
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 92-562
Cow position:
Alignm length: 500
Alignm identity: 312
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 253

Conread position: 103-562
Cow position:
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 76

Conread position: 111-562
Cow position:
Alignm length: 460
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 57

Conread position: 112-561
Cow position:
Alignm length: 465
Alignm identity: 306
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 11

Conread position: 124-574
Cow position:
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 58

Conread position: 224-571
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 228-577
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 144, 15

Conread position: 231-574
Cow position:
Alignm length: 347
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 122

Conread position: 237-562
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 15, 87

Conread position: 238-574
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 131, 114

Conread position: 238-575
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 130, 21

Conread position: 244-560
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 5, 10

Conread position: 244-565
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 151

Conread position: 247-574
Cow position:
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 250-577
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 241, 32

Conread position: 253-575
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 34

Conread position: 259-573
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 77

Conread position: 260-545
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 30

Conread position: 283-562
Cow position:
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 295-531
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 70, 54

Conread position: 300-574
Cow position:
Alignm length: 277
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 21

Conread position: 316-574
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 36

Conread position: 317-574
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 35

Conread position: 325-575
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 27

Conread position: 335-570
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 20

Conread position: 341-542
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 96

Conread position: 362-562
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 45

Conread position: 370-574
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 416-577
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 67

Show alignments to all cow chromosomes.