Cow genome map


           Conread name:
           rret28_b20.y1
        

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               376
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 192
               

               Conread position:
               1-577
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               27-577
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               29-530
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               328
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               29-542
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 26
               

               Conread position:
               50-528
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               322
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               165, 23
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               53-530
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               336
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               122, 23
               

               Conread position:
               56-240
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               56-248
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               156, 115
               

               Conread position:
               56-477
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 44
               

               Conread position:
               56-529
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 44
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               56-572
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 46
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 33
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 46
               

               Conread position:
               57-574
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 43
               

               Conread position:
               76-577
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               345
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               79-562
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               93-562
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               308
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               140, 33
               

               Conread position:
               102-526
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               118, 26
               

               Conread position:
               104-576
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 78
               

               Conread position:
               108-562
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               224-546
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 19
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 115
               

               Conread position:
               238-575
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 113
               

               Conread position:
               239-477
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               133, 113
               

               Conread position:
               244-577
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 109
               

               Conread position:
               270-540
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 82
               

               Conread position:
               270-571
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               288-574
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               79, 74
               

               Conread position:
               288-577
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 64
               

               Conread position:
               289-559
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               303-574
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               322-574
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               364-530
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               367-561
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               124, 106
               
Show alignments to all cow chromosomes.