Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 1-562 |
| Cow position: | chr16:30072146-30072708 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 376 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 1-571 |
| Cow position: | chr16:12537226-12536632 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 192 |
| Conread position: | 1-577 |
| Cow position: | chr16:10967367-10966776 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 27-577 |
| Cow position: | chr16:18618367-18617801 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 29-530 |
| Cow position: | chr16:27512167-27511654 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 29-542 |
| Cow position: | chr16:41753843-41753323 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 26 |
| Conread position: | 50-528 |
| Cow position: | chr16:53092273-53092742 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 50-562 |
| Cow position: | chr16:25442417-25442936 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 50-562 |
| Cow position: | chr16:43896474-43895958 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 53-530 |
| Cow position: | chr16:52590889-52590408 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 336 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 122, 23 |
| Conread position: | 56-240 |
| Cow position: | chr16:39824717-39824898 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 56-248 |
| Cow position: | chr16:41762614-41762804 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 156, 115 |
| Conread position: | 56-477 |
| Cow position: | chr16:3088412-3087974 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 56-529 |
| Cow position: | chr16:20202764-20203250 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 44 |
| Conread position: | 56-562 |
| Cow position: | chr16:15185871-15186383 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-572 |
| Cow position: | chr16:28169530-28169002 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr16:25342763-25343292 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-574 |
| Cow position: | chr16:28470278-28469738 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 46 |
| Conread position: | 56-574 |
| Cow position: | chr16:37480063-37479533 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 33 |
| Conread position: | 56-574 |
| Cow position: | chr16:40295369-40294843 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 46 |
| Conread position: | 57-574 |
| Cow position: | chr16:33321-33854 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 76-577 |
| Cow position: | chr16:47627840-47627338 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 345 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 79-562 |
| Cow position: | chr16:7675647-7675152 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 93-562 |
| Cow position: | chr16:10797992-10798457 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 102-526 |
| Cow position: | chr16:42060136-42059704 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 302 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 118, 26 |
| Conread position: | 104-576 |
| Cow position: | chr16:3828501-3828010 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 108-562 |
| Cow position: | chr16:23251127-23250673 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 224-546 |
| Cow position: | chr16:38355125-38354816 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 143, 19 |
| Conread position: | 238-574 |
| Cow position: | chr16:4474612-4474283 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 238-575 |
| Cow position: | chr16:51039335-51039664 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 113 |
| Conread position: | 239-477 |
| Cow position: | chr16:25261465-25261703 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 133, 113 |
| Conread position: | 244-577 |
| Cow position: | chr16:41572396-41572727 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 109 |
| Conread position: | 270-540 |
| Cow position: | chr16:18580987-18580721 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 270-571 |
| Cow position: | chr16:28436106-28435802 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 288-574 |
| Cow position: | chr16:40556872-40556594 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 288-577 |
| Cow position: | chr16:28374942-28374659 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 289-559 |
| Cow position: | chr16:48406655-48406914 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 303-574 |
| Cow position: | chr16:49744388-49744122 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 322-574 |
| Cow position: | chr16:3770942-3770694 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 364-530 |
| Cow position: | chr16:54697765-54697925 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 367-561 |
| Cow position: | chr16:38537082-38536893 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 124, 106 |
Show alignments to all cow chromosomes.