Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 1-577 |
| Cow position: | chr17:2169732-2170319 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 38 |
| Conread position: | 49-573 |
| Cow position: | chr17:20003389-20003908 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 341 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 153, 51 |
| Conread position: | 50-574 |
| Cow position: | chr17:14936609-14936076 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 56-562 |
| Cow position: | chr17:40806173-40806691 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 56-574 |
| Cow position: | chr17:135996-136523 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 37 |
| Conread position: | 56-574 |
| Cow position: | chr17:11784224-11784764 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 56-574 |
| Cow position: | chr17:23323082-23322551 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 57-543 |
| Cow position: | chr17:9751071-9751569 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 57-577 |
| Cow position: | chr17:14306951-14306428 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 77-562 |
| Cow position: | chr17:6121172-6121671 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 82-322 |
| Cow position: | chr17:7941685-7941436 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 131 |
| Conread position: | 83-562 |
| Cow position: | chr17:16121196-16120724 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 85-562 |
| Cow position: | chr17:19267439-19266959 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 85-574 |
| Cow position: | chr17:15326674-15327174 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 86-577 |
| Cow position: | chr17:6000105-5999605 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 346 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 101-574 |
| Cow position: | chr17:2554865-2554378 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 81 |
| Conread position: | 111-560 |
| Cow position: | chr17:14295139-14294673 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 115-574 |
| Cow position: | chr17:19980712-19980242 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 67 |
| Conread position: | 147-574 |
| Cow position: | chr17:22561353-22561792 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 234-533 |
| Cow position: | chr17:17067891-17068178 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 196, 9 |
| Conread position: | 238-562 |
| Cow position: | chr17:39677925-39678262 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 129, 15 |
| Conread position: | 240-552 |
| Cow position: | chr17:3607163-3606855 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 133, 101 |
| Conread position: | 247-574 |
| Cow position: | chr17:34574317-34574640 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 247-574 |
| Cow position: | chr17:45271545-45271222 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 263-575 |
| Cow position: | chr17:1388457-1388157 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 294-577 |
| Cow position: | chr17:9230934-9230656 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 270, 150 |
| Conread position: | 325-577 |
| Cow position: | chr17:4675988-4676239 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 328-562 |
| Cow position: | chr17:14896605-14896836 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 39, 147 |
| Conread position: | 331-563 |
| Cow position: | chr17:18854079-18854296 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 337-577 |
| Cow position: | chr17:20667163-20667396 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 339-477 |
| Cow position: | chr17:21769541-21769403 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-577 |
| Cow position: | chr17:2031898-2032123 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 14 |
Show alignments to all cow chromosomes.