Cow genome map


           Conread name:
           rret28_b20.y1
        

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               1-577
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 197
               

               Conread position:
               2-575
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               29-574
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 71
               

               Conread position:
               30-577
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               50-561
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 50
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 34
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 34
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 12
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 32
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               50-577
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               56-571
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 31
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               56-577
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 91
               

               Conread position:
               57-211
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               57-574
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               57-575
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               58-246
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               72-577
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 34
               

               Conread position:
               80-535
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               319
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               126, 20
               

               Conread position:
               84-474
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               84-525
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               87-574
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               292
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               89-571
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               112-521
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 103
               

               Conread position:
               123-562
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               167-577
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               290
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               28, 46
               

               Conread position:
               178-565
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               203-576
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               228-529
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               235-533
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               5, 120
               

               Conread position:
               238-576
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 114
               

               Conread position:
               239-577
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 237
               

               Conread position:
               244-576
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 43
               

               Conread position:
               244-577
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               250-575
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               7, 188
               

               Conread position:
               253-574
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 102
               

               Conread position:
               254-576
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               255-576
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               112, 94
               

               Conread position:
               263-562
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 52
               

               Conread position:
               264-577
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 85
               

               Conread position:
               277-539
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               76, 94
               

               Conread position:
               277-574
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               90, 78
               

               Conread position:
               288-561
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               203, 71
               

               Conread position:
               305-574
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               305-575
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 47
               

               Conread position:
               310-574
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               313-574
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               313-574
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               325-557
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               352-576
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               352-577
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 136
               

               Conread position:
               358-577
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               133, 81
               

               Conread position:
               366-576
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               376-572
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 104
               

               Conread position:
               386-562
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               386-574
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               402-574
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 0
               
Show alignments to all cow chromosomes.