Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 31-562 |
| Cow position: | chr20:37581680-37582223 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 49-542 |
| Cow position: | chr20:18108040-18108535 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 50-512 |
| Cow position: | chr20:9547181-9547655 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 50 |
| Conread position: | 50-562 |
| Cow position: | chr20:15293518-15294040 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 33 |
| Conread position: | 50-574 |
| Cow position: | chr20:23468130-23467597 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 54-574 |
| Cow position: | chr20:25899228-25899759 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 56-248 |
| Cow position: | chr20:7573026-7572832 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 159, 45 |
| Conread position: | 56-562 |
| Cow position: | chr20:15066992-15067499 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 345 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 61, 44 |
| Conread position: | 57-577 |
| Cow position: | chr20:10853806-10853289 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 84-562 |
| Cow position: | chr20:13764463-13764952 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 94-577 |
| Cow position: | chr20:14868778-14868295 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 99-477 |
| Cow position: | chr20:19214561-19214943 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 115-574 |
| Cow position: | chr20:16178149-16177678 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 122-560 |
| Cow position: | chr20:5226909-5226476 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 228-575 |
| Cow position: | chr20:39881001-39881342 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 238-571 |
| Cow position: | chr20:28563838-28563511 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 263-549 |
| Cow position: | chr20:33062418-33062128 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 269-574 |
| Cow position: | chr20:12436630-12436327 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 281-552 |
| Cow position: | chr20:15323770-15324032 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 281-574 |
| Cow position: | chr20:33598222-33598511 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 290-577 |
| Cow position: | chr20:7570452-7570163 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 309-574 |
| Cow position: | chr20:12046323-12046583 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 317-571 |
| Cow position: | chr20:21718377-21718628 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 338-577 |
| Cow position: | chr20:7513187-7513418 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 339-577 |
| Cow position: | chr20:16957876-16957642 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 353-545 |
| Cow position: | chr20:6900263-6900074 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 362-574 |
| Cow position: | chr20:10867927-10867719 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 55 |
| Conread position: | 376-574 |
| Cow position: | chr20:28261117-28260921 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 387-577 |
| Cow position: | chr20:5075909-5076096 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 394-577 |
| Cow position: | chr20:31078890-31079071 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 132, 86 |
Show alignments to all cow chromosomes.