Cow genome map

Conread name: rret28_b20.y1

Conread position: 2-246
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 185

Conread position: 49-571
Cow position:
Alignm length: 539
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 52

Conread position: 50-561
Cow position:
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 20

Conread position: 50-562
Cow position:
Alignm length: 531
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 33

Conread position: 50-562
Cow position:
Alignm length: 533
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 34

Conread position: 50-562
Cow position:
Alignm length: 542
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 33

Conread position: 50-571
Cow position:
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 54-562
Cow position:
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 46

Conread position: 56-544
Cow position:
Alignm length: 508
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 14

Conread position: 56-562
Cow position:
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-562
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 56-562
Cow position:
Alignm length: 528
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-562
Cow position:
Alignm length: 532
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-562
Cow position:
Alignm length: 536
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 525
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 45

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 58-574
Cow position:
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 42

Conread position: 78-571
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 80-562
Cow position:
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 134

Conread position: 80-574
Cow position:
Alignm length: 518
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 82-245
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 18

Conread position: 82-561
Cow position:
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 18

Conread position: 82-574
Cow position:
Alignm length: 514
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 20

Conread position: 97-562
Cow position:
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 18

Conread position: 139-574
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 52

Conread position: 152-577
Cow position:
Alignm length: 428
Alignm identity: 275
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 48

Conread position: 188-574
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 195-577
Cow position:
Alignm length: 384
Alignm identity: 253
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 174, 24

Conread position: 202-562
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 11

Conread position: 223-574
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 129

Conread position: 229-577
Cow position:
Alignm length: 354
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 262, 15

Conread position: 234-560
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 18, 57

Conread position: 234-560
Cow position:
Alignm length: 329
Alignm identity: 207
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 28

Conread position: 240-534
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 89, 73

Conread position: 244-571
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 123, 86

Conread position: 247-562
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 126, 58

Conread position: 247-577
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 24

Conread position: 252-575
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 115, 35

Conread position: 254-555
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 60

Conread position: 254-574
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 113, 98

Conread position: 260-532
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 107, 9

Conread position: 274-577
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 84

Conread position: 289-527
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 63

Conread position: 306-577
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 185, 46

Conread position: 317-574
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 35

Conread position: 349-575
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 138

Conread position: 352-574
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 123

Conread position: 370-574
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 115

Conread position: 370-574
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 105

Conread position: 371-577
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 90

Conread position: 374-575
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 27

Conread position: 376-577
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 93, 18

Conread position: 388-574
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 84

Show alignments to all cow chromosomes.