Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 1-544 |
| Cow position: | chr23:7044774-7044233 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 71 |
| Conread position: | 1-571 |
| Cow position: | chr23:15178479-15179068 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 1-574 |
| Cow position: | chr23:38579114-38579675 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 27-577 |
| Cow position: | chr23:13512536-13513085 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 50-562 |
| Cow position: | chr23:19491024-19491546 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 50-574 |
| Cow position: | chr23:965022-964494 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 50-575 |
| Cow position: | chr23:38582133-38582630 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 50-577 |
| Cow position: | chr23:30237757-30238279 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 12 |
| Conread position: | 56-557 |
| Cow position: | chr23:14972479-14971970 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 56-562 |
| Cow position: | chr23:4639115-4638601 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 56-562 |
| Cow position: | chr23:5873095-5872574 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 44 |
| Conread position: | 56-562 |
| Cow position: | chr23:28304392-28304911 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 56-572 |
| Cow position: | chr23:2025603-2025075 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-574 |
| Cow position: | chr23:608192-608720 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 44 |
| Conread position: | 56-574 |
| Cow position: | chr23:2759375-2759908 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 56-574 |
| Cow position: | chr23:7314387-7314919 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr23:11714389-11713858 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 44 |
| Conread position: | 56-574 |
| Cow position: | chr23:22145829-22145298 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 56-574 |
| Cow position: | chr23:32351285-32350758 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 58-562 |
| Cow position: | chr23:15876090-15875575 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 76-170 |
| Cow position: | chr23:19451769-19451863 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-545 |
| Cow position: | chr23:11329798-11330270 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 84-562 |
| Cow position: | chr23:36029875-36029393 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 104-562 |
| Cow position: | chr23:16700756-16701238 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 81, 152 |
| Conread position: | 109-562 |
| Cow position: | chr23:1400676-1400217 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 315 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 120-446 |
| Cow position: | chr23:11074938-11074603 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 238-574 |
| Cow position: | chr23:2577305-2577635 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 253, 26 |
| Conread position: | 244-574 |
| Cow position: | chr23:1340120-1339795 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 249-577 |
| Cow position: | chr23:2342794-2343104 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 249-577 |
| Cow position: | chr23:7356924-7357248 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 103 |
| Conread position: | 250-573 |
| Cow position: | chr23:948135-947820 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 251-574 |
| Cow position: | chr23:10874914-10874591 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 101 |
| Conread position: | 255-477 |
| Cow position: | chr23:22168361-22168583 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 112, 97 |
| Conread position: | 265-530 |
| Cow position: | chr23:37130087-37129825 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 102, 5 |
| Conread position: | 270-577 |
| Cow position: | chr23:35431635-35431343 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 289-561 |
| Cow position: | chr23:31123769-31123497 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 69 |
| Conread position: | 334-574 |
| Cow position: | chr23:19279246-19279011 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 91, 18 |
Show alignments to all cow chromosomes.