Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-544
Cow position:
Alignm length: 560
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 71

Conread position: 1-571
Cow position:
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 107

Conread position: 1-574
Cow position:
Alignm length: 582
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 27-577
Cow position:
Alignm length: 566
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 50-562
Cow position:
Alignm length: 535
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 50-574
Cow position:
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 50-575
Cow position:
Alignm length: 529
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 50-577
Cow position:
Alignm length: 540
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 12

Conread position: 56-557
Cow position:
Alignm length: 524
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 44

Conread position: 56-562
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 46

Conread position: 56-562
Cow position:
Alignm length: 531
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 44

Conread position: 56-562
Cow position:
Alignm length: 529
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-572
Cow position:
Alignm length: 540
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-574
Cow position:
Alignm length: 536
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 44

Conread position: 56-574
Cow position:
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 44

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 58-562
Cow position:
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 42

Conread position: 76-170
Cow position:
Alignm length: 95
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 78-545
Cow position:
Alignm length: 481
Alignm identity: 295
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 15

Conread position: 84-562
Cow position:
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 104-562
Cow position:
Alignm length: 485
Alignm identity: 300
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 81, 152

Conread position: 109-562
Cow position:
Alignm length: 472
Alignm identity: 315
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 59

Conread position: 120-446
Cow position:
Alignm length: 340
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 96, 57

Conread position: 238-574
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 253, 26

Conread position: 244-574
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 112

Conread position: 249-577
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 35

Conread position: 249-577
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 103

Conread position: 250-573
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 108, 55

Conread position: 251-574
Cow position:
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 101

Conread position: 255-477
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 112, 97

Conread position: 265-530
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 102, 5

Conread position: 270-577
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 81

Conread position: 289-561
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 69

Conread position: 334-574
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 18

Show alignments to all cow chromosomes.