Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 1-562 |
| Cow position: | chr24:17409964-17410533 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 1-574 |
| Cow position: | chr24:16560817-16560213 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 29-572 |
| Cow position: | chr24:36298949-36299502 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 16 |
| Conread position: | 50-561 |
| Cow position: | chr24:22321296-22321816 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 354 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 147, 19 |
| Conread position: | 50-574 |
| Cow position: | chr24:6963190-6962653 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 50 |
| Conread position: | 56-512 |
| Cow position: | chr24:23504293-23503824 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-571 |
| Cow position: | chr24:4413980-4413465 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 56-574 |
| Cow position: | chr24:6337949-6338479 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 44 |
| Conread position: | 56-574 |
| Cow position: | chr24:7063109-7063635 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr24:13044061-13043531 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-577 |
| Cow position: | chr24:6353704-6354234 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 57-562 |
| Cow position: | chr24:38585567-38585050 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 46 |
| Conread position: | 79-562 |
| Cow position: | chr24:11938375-11937884 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 95-577 |
| Cow position: | chr24:37215406-37214913 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 335 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 120, 14 |
| Conread position: | 106-574 |
| Cow position: | chr24:23094409-23093934 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 73 |
| Conread position: | 115-562 |
| Cow position: | chr24:29407793-29407345 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 124-577 |
| Cow position: | chr24:17300271-17299812 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 128-562 |
| Cow position: | chr24:39405078-39404630 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 228-562 |
| Cow position: | chr24:17927799-17927473 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 139, 14 |
| Conread position: | 235-574 |
| Cow position: | chr24:6411239-6411571 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 240-562 |
| Cow position: | chr24:20123608-20123294 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 244-540 |
| Cow position: | chr24:42158491-42158213 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 247-574 |
| Cow position: | chr24:11151350-11151031 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 65 |
| Conread position: | 247-574 |
| Cow position: | chr24:40550397-40550720 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 252-577 |
| Cow position: | chr24:19183944-19184264 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 254-574 |
| Cow position: | chr24:36723831-36724140 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 296, 97 |
| Conread position: | 259-562 |
| Cow position: | chr24:14870538-14870240 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 108, 81 |
| Conread position: | 277-571 |
| Cow position: | chr24:30816877-30817169 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 294-562 |
| Cow position: | chr24:13113799-13114063 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 325-577 |
| Cow position: | chr24:11563409-11563163 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 331-574 |
| Cow position: | chr24:6323412-6323169 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 8, 144 |
| Conread position: | 363-574 |
| Cow position: | chr24:16182485-16182692 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 363-577 |
| Cow position: | chr24:14174855-14174647 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 386-577 |
| Cow position: | chr24:38639462-38639645 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 105, 30 |
Show alignments to all cow chromosomes.