Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 35-477 |
| Cow position: | chr28:7059164-7058704 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 50-532 |
| Cow position: | chr28:10615479-10614995 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 6 |
| Conread position: | 50-562 |
| Cow position: | chr28:3190732-3190207 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 52 |
| Conread position: | 50-562 |
| Cow position: | chr28:14703861-14703339 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 50-562 |
| Cow position: | chr28:17389923-17390447 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 50-574 |
| Cow position: | chr28:1506388-1506917 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 50-574 |
| Cow position: | chr28:10580352-10579818 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 50-574 |
| Cow position: | chr28:17665785-17665271 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 50-577 |
| Cow position: | chr28:591437-590893 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 357 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 166, 19 |
| Conread position: | 54-574 |
| Cow position: | chr28:8719430-8718908 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 25 |
| Conread position: | 56-558 |
| Cow position: | chr28:33638070-33638580 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-562 |
| Cow position: | chr28:18518921-18518398 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 37 |
| Conread position: | 56-574 |
| Cow position: | chr28:784183-784719 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-574 |
| Cow position: | chr28:1459621-1460152 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr28:12408699-12408166 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-577 |
| Cow position: | chr28:18099972-18099440 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 38 |
| Conread position: | 58-544 |
| Cow position: | chr28:5799820-5800332 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 346 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 157, 42 |
| Conread position: | 78-574 |
| Cow position: | chr28:24669146-24669648 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 15 |
| Conread position: | 82-246 |
| Cow position: | chr28:9295804-9295640 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 87-577 |
| Cow position: | chr28:34420103-34420598 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 141, 90 |
| Conread position: | 89-577 |
| Cow position: | chr28:17187815-17188316 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 334 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 165-540 |
| Cow position: | chr28:11953616-11953984 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 202-577 |
| Cow position: | chr28:27958028-27957660 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 223-575 |
| Cow position: | chr28:8785151-8785489 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 79 |
| Conread position: | 247-543 |
| Cow position: | chr28:15998837-15999128 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 247-562 |
| Cow position: | chr28:308108-307796 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 108 |
| Conread position: | 247-574 |
| Cow position: | chr28:17630833-17631156 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 270-562 |
| Cow position: | chr28:25771680-25771977 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 219 |
| Conread position: | 288-574 |
| Cow position: | chr28:23311533-23311259 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 297-574 |
| Cow position: | chr28:10644685-10644411 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 297-577 |
| Cow position: | chr28:759431-759160 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 331-562 |
| Cow position: | chr28:21567715-21567938 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 343-577 |
| Cow position: | chr28:9295257-9295031 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 417-575 |
| Cow position: | chr28:24559793-24559956 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 58 |
Show alignments to all cow chromosomes.