Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-574
Cow position:
Alignm length: 602
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 106

Conread position: 15-562
Cow position:
Alignm length: 569
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 66

Conread position: 31-577
Cow position:
Alignm length: 555
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 47-244
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 49

Conread position: 49-244
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 136

Conread position: 49-535
Cow position:
Alignm length: 508
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 50-571
Cow position:
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 50-574
Cow position:
Alignm length: 549
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 37

Conread position: 56-533
Cow position:
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 44

Conread position: 56-562
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-562
Cow position:
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 43

Conread position: 56-562
Cow position:
Alignm length: 523
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 44

Conread position: 56-562
Cow position:
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-572
Cow position:
Alignm length: 538
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-574
Cow position:
Alignm length: 538
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 57-562
Cow position:
Alignm length: 527
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 43

Conread position: 57-577
Cow position:
Alignm length: 530
Alignm identity: 343
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 129, 22

Conread position: 71-574
Cow position:
Alignm length: 521
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 76-261
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 99

Conread position: 78-577
Cow position:
Alignm length: 513
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 15

Conread position: 82-562
Cow position:
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 82-574
Cow position:
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 19

Conread position: 83-575
Cow position:
Alignm length: 499
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 10

Conread position: 85-574
Cow position:
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 94-564
Cow position:
Alignm length: 491
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 88

Conread position: 112-557
Cow position:
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 81

Conread position: 113-574
Cow position:
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 66

Conread position: 114-574
Cow position:
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 101

Conread position: 229-577
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 44

Conread position: 238-574
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 6

Conread position: 239-574
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 114

Conread position: 244-540
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 96

Conread position: 244-575
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 64

Conread position: 247-548
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 117, 105

Conread position: 247-562
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 105

Conread position: 250-576
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 259-557
Cow position:
Alignm length: 302
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 103

Conread position: 268-575
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 207

Conread position: 268-575
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 207

Conread position: 270-558
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 42

Conread position: 270-562
Cow position:
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 97

Conread position: 283-570
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 69

Conread position: 288-562
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 25

Conread position: 289-574
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 75, 63

Conread position: 304-561
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 45

Conread position: 306-576
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 46

Conread position: 315-576
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 340-574
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 12

Conread position: 354-577
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 14

Conread position: 367-562
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 69

Conread position: 368-575
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 101, 9

Conread position: 376-577
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 192, 47

Conread position: 416-562
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 63

Show alignments to all cow chromosomes.