Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-574
Cow position:
Alignm length: 600
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 110

Conread position: 1-574
Cow position:
Alignm length: 591
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 37

Conread position: 3-477
Cow position:
Alignm length: 494
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 72

Conread position: 26-572
Cow position:
Alignm length: 586
Alignm identity: 385
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 14

Conread position: 27-577
Cow position:
Alignm length: 557
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 148

Conread position: 36-577
Cow position:
Alignm length: 563
Alignm identity: 359
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 44

Conread position: 37-576
Cow position:
Alignm length: 570
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 26

Conread position: 49-562
Cow position:
Alignm length: 538
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 53

Conread position: 49-577
Cow position:
Alignm length: 542
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 51

Conread position: 50-246
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 53

Conread position: 50-561
Cow position:
Alignm length: 534
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 50-561
Cow position:
Alignm length: 534
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 50-562
Cow position:
Alignm length: 532
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 298

Conread position: 50-574
Cow position:
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 50-574
Cow position:
Alignm length: 530
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 7

Conread position: 50-577
Cow position:
Alignm length: 545
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 53-574
Cow position:
Alignm length: 543
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 54-562
Cow position:
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 48

Conread position: 54-562
Cow position:
Alignm length: 528
Alignm identity: 343
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 54

Conread position: 56-477
Cow position:
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-515
Cow position:
Alignm length: 483
Alignm identity: 323
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 12

Conread position: 56-559
Cow position:
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 15

Conread position: 56-562
Cow position:
Alignm length: 533
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 56-562
Cow position:
Alignm length: 528
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-574
Cow position:
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 56-574
Cow position:
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 44

Conread position: 57-574
Cow position:
Alignm length: 525
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 43

Conread position: 80-575
Cow position:
Alignm length: 507
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 97

Conread position: 82-574
Cow position:
Alignm length: 512
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 82-574
Cow position:
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 84-574
Cow position:
Alignm length: 500
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 18

Conread position: 86-562
Cow position:
Alignm length: 495
Alignm identity: 320
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 7

Conread position: 89-562
Cow position:
Alignm length: 496
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 13

Conread position: 105-545
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 75

Conread position: 111-576
Cow position:
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 71

Conread position: 225-559
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 19

Conread position: 235-574
Cow position:
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 118

Conread position: 238-535
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 20

Conread position: 238-540
Cow position:
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 114

Conread position: 238-574
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 65

Conread position: 240-562
Cow position:
Alignm length: 326
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 19

Conread position: 244-562
Cow position:
Alignm length: 328
Alignm identity: 216
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 120

Conread position: 247-572
Cow position:
Alignm length: 329
Alignm identity: 216
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 6

Conread position: 247-574
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 249-577
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 118, 103

Conread position: 253-574
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 70

Conread position: 259-562
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 39

Conread position: 272-574
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 17

Conread position: 288-577
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 29

Conread position: 308-560
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 30

Conread position: 310-574
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 42

Conread position: 327-574
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 26

Conread position: 331-543
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 21

Conread position: 370-575
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 93

Show alignments to all cow chromosomes.