Cow genome map

Conread name: rret28_b20.y1

Conread position: 1-562
Cow position:
Alignm length: 585
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 47

Conread position: 1-575
Cow position:
Alignm length: 600
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 1-577
Cow position:
Alignm length: 587
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 24

Conread position: 49-561
Cow position:
Alignm length: 534
Alignm identity: 350
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 63, 32

Conread position: 50-558
Cow position:
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 33

Conread position: 50-562
Cow position:
Alignm length: 534
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 50-577
Cow position:
Alignm length: 528
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 50-577
Cow position:
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 43

Conread position: 51-477
Cow position:
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 50

Conread position: 51-577
Cow position:
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 70

Conread position: 55-577
Cow position:
Alignm length: 551
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 310

Conread position: 56-213
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 56-434
Cow position:
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-548
Cow position:
Alignm length: 519
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 44

Conread position: 56-561
Cow position:
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 56-562
Cow position:
Alignm length: 513
Alignm identity: 319
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 20

Conread position: 56-562
Cow position:
Alignm length: 529
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 56-562
Cow position:
Alignm length: 527
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-562
Cow position:
Alignm length: 527
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-574
Cow position:
Alignm length: 543
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 56-574
Cow position:
Alignm length: 542
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 46

Conread position: 56-574
Cow position:
Alignm length: 538
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 540
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 44

Conread position: 56-574
Cow position:
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 56-574
Cow position:
Alignm length: 537
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 56-574
Cow position:
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 44

Conread position: 56-574
Cow position:
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 44

Conread position: 56-577
Cow position:
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 12

Conread position: 71-554
Cow position:
Alignm length: 504
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 29

Conread position: 82-560
Cow position:
Alignm length: 489
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 82-562
Cow position:
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 85-574
Cow position:
Alignm length: 510
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 93-562
Cow position:
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 86

Conread position: 107-476
Cow position:
Alignm length: 387
Alignm identity: 254
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 59, 196

Conread position: 115-560
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 179-574
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 34

Conread position: 189-574
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 194-574
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 224-577
Cow position:
Alignm length: 356
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 65

Conread position: 228-574
Cow position:
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 126

Conread position: 238-573
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 39

Conread position: 244-525
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 107

Conread position: 247-574
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 183, 72

Conread position: 247-574
Cow position:
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 253-577
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 114, 99

Conread position: 254-574
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 98

Conread position: 259-574
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 105, 51

Conread position: 274-577
Cow position:
Alignm length: 305
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 127

Conread position: 277-574
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 75

Conread position: 287-577
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 204, 43

Conread position: 288-562
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 64

Conread position: 294-574
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 58

Conread position: 305-562
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 47

Conread position: 315-477
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 317-562
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 35

Conread position: 324-575
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 43, 28

Conread position: 336-565
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 218, 16

Conread position: 376-574
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 394-532
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 78

Conread position: 403-574
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 77

Conread position: 440-577
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 40

Show alignments to all cow chromosomes.