Cow genome map
| Conread name: | rret28_b20.y1 |
| Conread position: | 1-562 |
| Cow position: | chr7:29471940-29472517 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 1-575 |
| Cow position: | chr7:68439523-68440084 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 1-577 |
| Cow position: | chr7:58350520-58349966 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 49-561 |
| Cow position: | chr7:57084462-57084978 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 350 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 50-558 |
| Cow position: | chr7:27788492-27789009 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 50-562 |
| Cow position: | chr7:38398355-38398876 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 50-577 |
| Cow position: | chr7:30304413-30304910 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 50-577 |
| Cow position: | chr7:68896187-68896719 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 51-477 |
| Cow position: | chr7:1609102-1608654 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 51-577 |
| Cow position: | chr7:1402959-1402440 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 55-577 |
| Cow position: | chr7:45952164-45952705 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 310 |
| Conread position: | 56-213 |
| Cow position: | chr7:57563565-57563411 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 56-434 |
| Cow position: | chr7:30117945-30117557 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 56-548 |
| Cow position: | chr7:546379-546886 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 56-561 |
| Cow position: | chr7:444719-444203 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 46 |
| Conread position: | 56-562 |
| Cow position: | chr7:22187071-22186589 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 319 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 56-562 |
| Cow position: | chr7:45947613-45947093 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 56-562 |
| Cow position: | chr7:62445612-62445093 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-562 |
| Cow position: | chr7:64239452-64238934 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 56-574 |
| Cow position: | chr7:11462599-11462064 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr7:20797911-20797377 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 56-574 |
| Cow position: | chr7:21986943-21987475 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 56-574 |
| Cow position: | chr7:27100749-27100220 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr7:48804896-48804365 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 56-574 |
| Cow position: | chr7:55040946-55040415 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 56-574 |
| Cow position: | chr7:60728914-60728385 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 56-574 |
| Cow position: | chr7:65812362-65812903 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 56-574 |
| Cow position: | chr7:67430105-67430622 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 44 |
| Conread position: | 56-577 |
| Cow position: | chr7:67490231-67490745 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 71-554 |
| Cow position: | chr7:49731030-49731525 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 82-560 |
| Cow position: | chr7:40266391-40265930 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 82-562 |
| Cow position: | chr7:20773775-20773286 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 85-574 |
| Cow position: | chr7:61579070-61579571 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 93-562 |
| Cow position: | chr7:24806909-24806429 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 107-476 |
| Cow position: | chr7:40006348-40005972 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 59, 196 |
| Conread position: | 115-560 |
| Cow position: | chr7:3518878-3519334 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 179-574 |
| Cow position: | chr7:48636016-48636401 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 189-574 |
| Cow position: | chr7:112292-112679 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 194-574 |
| Cow position: | chr7:34817336-34817715 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 224-577 |
| Cow position: | chr7:37021775-37022125 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 228-574 |
| Cow position: | chr7:26928452-26928108 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 238-573 |
| Cow position: | chr7:47974555-47974233 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 39 |
| Conread position: | 244-525 |
| Cow position: | chr7:24853708-24853429 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 107 |
| Conread position: | 247-574 |
| Cow position: | chr7:996672-996991 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 183, 72 |
| Conread position: | 247-574 |
| Cow position: | chr7:37010221-37009898 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 253-577 |
| Cow position: | chr7:41874516-41874196 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 114, 99 |
| Conread position: | 254-574 |
| Cow position: | chr7:29364707-29364381 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 98 |
| Conread position: | 259-574 |
| Cow position: | chr7:20557540-20557848 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 274-577 |
| Cow position: | chr7:65457173-65456879 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 99, 127 |
| Conread position: | 277-574 |
| Cow position: | chr7:19468647-19468355 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 287-577 |
| Cow position: | chr7:51192505-51192780 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 204, 43 |
| Conread position: | 288-562 |
| Cow position: | chr7:904360-904092 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 294-574 |
| Cow position: | chr7:59139469-59139744 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 305-562 |
| Cow position: | chr7:33404080-33403827 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 315-477 |
| Cow position: | chr7:57580826-57580668 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 317-562 |
| Cow position: | chr7:42303640-42303398 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 324-575 |
| Cow position: | chr7:45930545-45930301 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 336-565 |
| Cow position: | chr7:15009565-15009342 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 16 |
| Conread position: | 376-574 |
| Cow position: | chr7:3322264-3322074 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 394-532 |
| Cow position: | chr7:25136911-25137046 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 131, 78 |
| Conread position: | 403-574 |
| Cow position: | chr7:23814890-23815057 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 92, 77 |
| Conread position: | 440-577 |
| Cow position: | chr7:6801121-6801255 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 40 |
Show alignments to all cow chromosomes.