Cow genome map


           Conread name:
           rret28_b20.y1
        

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               1-572
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 81
               

               Conread position:
               33-574
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               49-577
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               361
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               50-554
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 34
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               336
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 7
               

               Conread position:
               56-563
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 37
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-576
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 47
               

               Conread position:
               57-577
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               58-577
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 41
               

               Conread position:
               58-577
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 124
               

               Conread position:
               78-577
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 22
               

               Conread position:
               82-574
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               84-557
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               84-562
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               89-577
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               355
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               99-574
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 83
               

               Conread position:
               101-575
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               115-562
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               119-545
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               188-560
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               194-577
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               61, 167
               

               Conread position:
               235-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               238-562
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 51
               

               Conread position:
               238-562
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               238-574
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               238-577
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 31
               

               Conread position:
               247-562
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 108
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 105
               

               Conread position:
               255-577
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               255-577
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               287-577
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               80, 65
               

               Conread position:
               346-526
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               367-574
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 111
               

               Conread position:
               376-574
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               389-577
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               398-558
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               82, 0
               
Show alignments to all cow chromosomes.