Cow genome map


           Conread name:
           rret28_b20.y1
        

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               373
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 178
               

               Conread position:
               24-477
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 200
               

               Conread position:
               49-576
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               49-577
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 36
               

               Conread position:
               50-557
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 12
               

               Conread position:
               50-561
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 7
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 7
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 19
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 19
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               51-349
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               51-562
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               54-564
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               54-574
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 14
               

               Conread position:
               56-245
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               159, 66
               

               Conread position:
               56-477
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-511
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 44
               

               Conread position:
               56-516
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-533
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 45
               

               Conread position:
               56-545
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 44
               

               Conread position:
               56-561
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               56-562
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 43
               

               Conread position:
               56-571
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               56-574
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 44
               

               Conread position:
               57-562
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 45
               

               Conread position:
               57-562
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 43
               

               Conread position:
               57-575
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               58-248
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               43, 117
               

               Conread position:
               59-563
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               349
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               157, 33
               

               Conread position:
               63-574
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 37
               

               Conread position:
               70-574
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               70-574
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               83-266
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               85-562
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               93-521
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               94-577
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               96-577
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 7
               

               Conread position:
               108-542
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               107, 69
               

               Conread position:
               117-577
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               99, 65
               

               Conread position:
               120-561
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 249
               

               Conread position:
               126-575
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 50
               

               Conread position:
               182-552
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               228-577
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 15
               

               Conread position:
               235-574
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               238-577
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               239-577
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               129, 71
               

               Conread position:
               240-577
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               244-576
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               246-562
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               134, 7
               

               Conread position:
               247-540
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               247-574
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               253-577
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 98
               

               Conread position:
               254-577
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               265-562
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               266-577
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               269-556
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               270-554
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               101, 89
               

               Conread position:
               272-562
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               272-577
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               283-562
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               316-574
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               317-561
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               317-574
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               321-574
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               345-571
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               356-577
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               372-540
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               379-575
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               381-560
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               110, 19
               

               Conread position:
               393-577
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 81
               
Show alignments to all cow chromosomes.