Cow genome map

Conread name: rret28_l8.y1

Conread position: 21-509
Cow position:
Alignm length: 505
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 77

Conread position: 21-648
Cow position:
Alignm length: 651
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 98

Conread position: 21-651
Cow position:
Alignm length: 659
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 169

Conread position: 21-651
Cow position:
Alignm length: 648
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 361

Conread position: 22-334
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 22-626
Cow position:
Alignm length: 622
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 106

Conread position: 22-630
Cow position:
Alignm length: 633
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 490

Conread position: 22-646
Cow position:
Alignm length: 649
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 102

Conread position: 22-647
Cow position:
Alignm length: 652
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 63

Conread position: 22-651
Cow position:
Alignm length: 652
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 588

Conread position: 22-651
Cow position:
Alignm length: 670
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 319

Conread position: 22-651
Cow position:
Alignm length: 667
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 598

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 47

Conread position: 22-651
Cow position:
Alignm length: 653
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 442

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 593

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 588

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 590

Conread position: 23-651
Cow position:
Alignm length: 660
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 199

Conread position: 23-651
Cow position:
Alignm length: 663
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 253

Conread position: 24-296
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 108

Conread position: 24-323
Cow position:
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 281

Conread position: 24-342
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 316

Conread position: 24-344
Cow position:
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-349
Cow position:
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 319

Conread position: 24-541
Cow position:
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 204

Conread position: 24-599
Cow position:
Alignm length: 596
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 31

Conread position: 24-602
Cow position:
Alignm length: 603
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 156

Conread position: 24-614
Cow position:
Alignm length: 613
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 440

Conread position: 24-630
Cow position:
Alignm length: 633
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 24-630
Cow position:
Alignm length: 628
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 585

Conread position: 24-640
Cow position:
Alignm length: 635
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 125

Conread position: 24-641
Cow position:
Alignm length: 656
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-641
Cow position:
Alignm length: 638
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 92

Conread position: 24-641
Cow position:
Alignm length: 642
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 465

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 24-641
Cow position:
Alignm length: 646
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 170

Conread position: 24-643
Cow position:
Alignm length: 659
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 24-645
Cow position:
Alignm length: 658
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 92

Conread position: 24-646
Cow position:
Alignm length: 653
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 169

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 391

Conread position: 24-651
Cow position:
Alignm length: 642
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-651
Cow position:
Alignm length: 640
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 42

Conread position: 24-651
Cow position:
Alignm length: 657
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 24-651
Cow position:
Alignm length: 673
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 654
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 100

Conread position: 25-536
Cow position:
Alignm length: 523
Alignm identity: 335
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 177

Conread position: 25-631
Cow position:
Alignm length: 642
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 260

Conread position: 25-651
Cow position:
Alignm length: 644
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 32

Conread position: 26-645
Cow position:
Alignm length: 641
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 31-651
Cow position:
Alignm length: 652
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 381

Conread position: 33-630
Cow position:
Alignm length: 617
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 170

Conread position: 35-626
Cow position:
Alignm length: 606
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 105

Conread position: 35-651
Cow position:
Alignm length: 635
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 73-647
Cow position:
Alignm length: 606
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 74-645
Cow position:
Alignm length: 599
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 192

Conread position: 74-647
Cow position:
Alignm length: 601
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 76

Conread position: 82-625
Cow position:
Alignm length: 557
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 108

Conread position: 85-651
Cow position:
Alignm length: 586
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 100

Conread position: 96-651
Cow position:
Alignm length: 584
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 106-541
Cow position:
Alignm length: 445
Alignm identity: 284
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 71, 147

Conread position: 110-645
Cow position:
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 118-651
Cow position:
Alignm length: 552
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 155

Conread position: 120-649
Cow position:
Alignm length: 548
Alignm identity: 343
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 5

Conread position: 126-577
Cow position:
Alignm length: 469
Alignm identity: 290
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 137

Conread position: 131-647
Cow position:
Alignm length: 526
Alignm identity: 335
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 120, 39

Conread position: 132-651
Cow position:
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 166

Conread position: 146-645
Cow position:
Alignm length: 527
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 147-651
Cow position:
Alignm length: 523
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 123

Conread position: 153-564
Cow position:
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 156

Conread position: 156-617
Cow position:
Alignm length: 481
Alignm identity: 316
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 9, 272

Conread position: 163-648
Cow position:
Alignm length: 510
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 182-536
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 129

Conread position: 202-651
Cow position:
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 257

Conread position: 226-616
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 198

Conread position: 232-546
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 228

Conread position: 238-546
Cow position:
Alignm length: 322
Alignm identity: 220
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 100, 16

Conread position: 238-583
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 106, 173

Conread position: 247-496
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 228

Conread position: 247-645
Cow position:
Alignm length: 423
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 250-651
Cow position:
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 255

Conread position: 252-617
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 260-647
Cow position:
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 41

Conread position: 261-577
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 28

Conread position: 275-641
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 329, 63

Conread position: 288-616
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 293-617
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 27

Conread position: 306-633
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 30

Conread position: 321-641
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 9

Conread position: 326-645
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 50, 20

Conread position: 331-623
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 9

Conread position: 332-601
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 15

Conread position: 337-587
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 111, 63

Conread position: 340-539
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 122

Conread position: 340-587
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 130

Conread position: 340-616
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 161

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 258

Conread position: 342-651
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 347-651
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 348-650
Cow position:
Alignm length: 319
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 8

Conread position: 353-651
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 363-647
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 102

Conread position: 365-647
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 21

Conread position: 375-583
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 93

Conread position: 382-643
Cow position:
Alignm length: 265
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 43

Conread position: 388-645
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 99

Conread position: 389-637
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 157

Conread position: 392-650
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 22

Conread position: 400-645
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 151

Conread position: 402-651
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 95

Conread position: 411-599
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 179

Conread position: 417-578
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 95

Conread position: 444-631
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 23

Conread position: 472-651
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 122

Conread position: 475-651
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 57

Conread position: 476-648
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 56

Conread position: 488-599
Cow position:
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 97

Show alignments to all cow chromosomes.