Cow genome map

Conread name: rret28_l8.y1

Conread position: 13-647
Cow position:
Alignm length: 671
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 234

Conread position: 17-286
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 92, 106

Conread position: 21-534
Cow position:
Alignm length: 529
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 21-640
Cow position:
Alignm length: 650
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 21-651
Cow position:
Alignm length: 655
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 21-651
Cow position:
Alignm length: 661
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 461

Conread position: 22-407
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-433
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 396

Conread position: 22-445
Cow position:
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-634
Cow position:
Alignm length: 656
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 294

Conread position: 22-641
Cow position:
Alignm length: 645
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 86

Conread position: 22-641
Cow position:
Alignm length: 640
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 22-650
Cow position:
Alignm length: 660
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 22-651
Cow position:
Alignm length: 653
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 254

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 330

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 580

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 121

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 593

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 73

Conread position: 22-651
Cow position:
Alignm length: 663
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 447

Conread position: 22-651
Cow position:
Alignm length: 663
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 203

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 22-651
Cow position:
Alignm length: 670
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 602

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 259

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 189

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 168

Conread position: 23-429
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 33

Conread position: 23-651
Cow position:
Alignm length: 643
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 24-216
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 143

Conread position: 24-298
Cow position:
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 246

Conread position: 24-315
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-543
Cow position:
Alignm length: 535
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 24-583
Cow position:
Alignm length: 586
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 65

Conread position: 24-624
Cow position:
Alignm length: 628
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 24-626
Cow position:
Alignm length: 627
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 588

Conread position: 24-630
Cow position:
Alignm length: 638
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 588

Conread position: 24-630
Cow position:
Alignm length: 636
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 24-641
Cow position:
Alignm length: 647
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 509

Conread position: 24-641
Cow position:
Alignm length: 662
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-644
Cow position:
Alignm length: 640
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 24-645
Cow position:
Alignm length: 648
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 112

Conread position: 24-645
Cow position:
Alignm length: 640
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 160

Conread position: 24-647
Cow position:
Alignm length: 639
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 134

Conread position: 24-651
Cow position:
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 40

Conread position: 24-651
Cow position:
Alignm length: 675
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 438

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 276

Conread position: 24-651
Cow position:
Alignm length: 655
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 439

Conread position: 24-651
Cow position:
Alignm length: 660
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 585

Conread position: 24-651
Cow position:
Alignm length: 658
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 440

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 585

Conread position: 25-292
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 260

Conread position: 26-641
Cow position:
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 365

Conread position: 29-645
Cow position:
Alignm length: 655
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 143

Conread position: 30-651
Cow position:
Alignm length: 654
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 601

Conread position: 35-630
Cow position:
Alignm length: 615
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 20

Conread position: 35-643
Cow position:
Alignm length: 639
Alignm identity: 407
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 41, 145

Conread position: 43-651
Cow position:
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 11

Conread position: 44-651
Cow position:
Alignm length: 641
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 421

Conread position: 51-651
Cow position:
Alignm length: 625
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 51-651
Cow position:
Alignm length: 631
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 329

Conread position: 57-651
Cow position:
Alignm length: 626
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 67-641
Cow position:
Alignm length: 618
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 328

Conread position: 76-581
Cow position:
Alignm length: 523
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 30

Conread position: 76-611
Cow position:
Alignm length: 560
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 76-642
Cow position:
Alignm length: 574
Alignm identity: 368
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 117

Conread position: 78-626
Cow position:
Alignm length: 577
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 544

Conread position: 106-641
Cow position:
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 372

Conread position: 108-400
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 116

Conread position: 125-391
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 128, 107

Conread position: 126-597
Cow position:
Alignm length: 475
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 114

Conread position: 163-617
Cow position:
Alignm length: 476
Alignm identity: 304
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 19

Conread position: 170-500
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 119

Conread position: 177-435
Cow position:
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 177-645
Cow position:
Alignm length: 481
Alignm identity: 315
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 97

Conread position: 182-440
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 88

Conread position: 186-641
Cow position:
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 427

Conread position: 221-628
Cow position:
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 46

Conread position: 238-651
Cow position:
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 196

Conread position: 244-647
Cow position:
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 188

Conread position: 247-651
Cow position:
Alignm length: 414
Alignm identity: 275
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 129, 43

Conread position: 252-555
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 130

Conread position: 270-650
Cow position:
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 335

Conread position: 281-580
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 146

Conread position: 289-651
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 141

Conread position: 300-651
Cow position:
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 251

Conread position: 304-651
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 10

Conread position: 322-630
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 322-630
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 322-651
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 149

Conread position: 337-587
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 340-546
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 77

Conread position: 340-647
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 258

Conread position: 341-625
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 341-630
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 341-630
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 111

Conread position: 348-647
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 353-503
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 362-580
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 105

Conread position: 371-638
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 199

Conread position: 377-566
Cow position:
Alignm length: 192
Alignm identity: 157
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 61

Conread position: 392-580
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 396-630
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 44

Conread position: 396-645
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 51, 68

Conread position: 396-651
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 55

Conread position: 397-617
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 403-597
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 405-651
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 128

Conread position: 416-651
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 125

Conread position: 418-651
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 24

Conread position: 436-630
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 145

Conread position: 455-649
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 131

Conread position: 472-630
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 473-651
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 117

Conread position: 488-632
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 101

Show alignments to all cow chromosomes.