Cow genome map

Conread name: rret28_l8.y1

Conread position: 8-651
Cow position:
Alignm length: 669
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 6

Conread position: 21-336
Cow position:
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 21-338
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 21-530
Cow position:
Alignm length: 528
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 444

Conread position: 21-641
Cow position:
Alignm length: 649
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 443

Conread position: 22-170
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 22-320
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 242

Conread position: 22-546
Cow position:
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 22-558
Cow position:
Alignm length: 555
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 406

Conread position: 22-568
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-616
Cow position:
Alignm length: 625
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 596

Conread position: 22-651
Cow position:
Alignm length: 652
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 75

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 362

Conread position: 22-651
Cow position:
Alignm length: 663
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 594

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 589

Conread position: 22-651
Cow position:
Alignm length: 663
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 53

Conread position: 22-651
Cow position:
Alignm length: 650
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 180

Conread position: 23-647
Cow position:
Alignm length: 654
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 175

Conread position: 23-650
Cow position:
Alignm length: 657
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 123

Conread position: 24-298
Cow position:
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 24-488
Cow position:
Alignm length: 483
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-616
Cow position:
Alignm length: 609
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 26

Conread position: 24-623
Cow position:
Alignm length: 619
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-630
Cow position:
Alignm length: 619
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 82

Conread position: 24-641
Cow position:
Alignm length: 640
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 440

Conread position: 24-641
Cow position:
Alignm length: 656
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 658
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-651
Cow position:
Alignm length: 654
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 132

Conread position: 24-651
Cow position:
Alignm length: 651
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 36

Conread position: 24-651
Cow position:
Alignm length: 664
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 320

Conread position: 24-651
Cow position:
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 25-630
Cow position:
Alignm length: 627
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 96

Conread position: 25-651
Cow position:
Alignm length: 649
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 90

Conread position: 25-651
Cow position:
Alignm length: 650
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 31-651
Cow position:
Alignm length: 645
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 248

Conread position: 35-651
Cow position:
Alignm length: 633
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 43-651
Cow position:
Alignm length: 638
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 169

Conread position: 57-651
Cow position:
Alignm length: 613
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 13

Conread position: 74-615
Cow position:
Alignm length: 561
Alignm identity: 344
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 74, 7

Conread position: 104-649
Cow position:
Alignm length: 568
Alignm identity: 353
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 30

Conread position: 104-651
Cow position:
Alignm length: 565
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 21

Conread position: 106-643
Cow position:
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 175

Conread position: 113-647
Cow position:
Alignm length: 557
Alignm identity: 360
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 62

Conread position: 118-651
Cow position:
Alignm length: 566
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 371

Conread position: 124-617
Cow position:
Alignm length: 505
Alignm identity: 330
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 127, 109

Conread position: 126-647
Cow position:
Alignm length: 543
Alignm identity: 353
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 122, 49

Conread position: 130-651
Cow position:
Alignm length: 546
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 330

Conread position: 131-517
Cow position:
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 17

Conread position: 131-587
Cow position:
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 157-613
Cow position:
Alignm length: 471
Alignm identity: 299
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 67

Conread position: 181-650
Cow position:
Alignm length: 477
Alignm identity: 291
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 11

Conread position: 190-651
Cow position:
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 183

Conread position: 212-641
Cow position:
Alignm length: 448
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 390

Conread position: 213-651
Cow position:
Alignm length: 456
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 171

Conread position: 231-617
Cow position:
Alignm length: 405
Alignm identity: 265
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 208

Conread position: 238-651
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 375

Conread position: 243-445
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 24

Conread position: 247-632
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 155, 91

Conread position: 262-642
Cow position:
Alignm length: 395
Alignm identity: 254
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 12

Conread position: 317-643
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 323-641
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 70

Conread position: 331-647
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 21

Conread position: 333-651
Cow position:
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 108

Conread position: 340-645
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 340-651
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 33

Conread position: 341-646
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 102

Conread position: 377-611
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 15

Conread position: 377-651
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 92

Conread position: 390-651
Cow position:
Alignm length: 276
Alignm identity: 204
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 207

Conread position: 418-641
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 123

Conread position: 443-641
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 455-645
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 472-650
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 59

Conread position: 472-651
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 114

Conread position: 478-651
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 116

Show alignments to all cow chromosomes.