Cow genome map

Conread name: rret28_l8.y1

Conread position: 21-464
Cow position: chr14:17685750-17686212 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 21-531
Cow position: chr14:44378153-44378678 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 21-630
Cow position: chr14:33677415-33678050 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 145

Conread position: 21-641
Cow position: chr14:48253948-48253315 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 21-644
Cow position: chr14:27977711-27978363 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 592

Conread position: 21-645
Cow position: chr14:5529420-5530071 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 438

Conread position: 21-645
Cow position: chr14:13863739-13863099 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 144

Conread position: 21-645
Cow position: chr14:40341408-40342051 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 84

Conread position: 21-651
Cow position: chr14:44226752-44227385 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 320

Conread position: 21-651
Cow position: chr14:45028650-45028001 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 295

Conread position: 22-282
Cow position: chr14:45161451-45161710 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 22-463
Cow position: chr14:23257712-23258168 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 22-546
Cow position: chr14:30584603-30584057 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 260

Conread position: 22-598
Cow position: chr14:30596025-30595417 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 22-612
Cow position: chr14:2284691-2285294 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 341

Conread position: 22-616
Cow position: chr14:45671694-45671077 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 102

Conread position: 22-650
Cow position: chr14:46392170-46391536 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 22-651
Cow position: chr14:750935-751566 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 74

Conread position: 22-651
Cow position: chr14:9045928-9046587 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 598

Conread position: 22-651
Cow position: chr14:17491106-17490449 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 596

Conread position: 22-651
Cow position: chr14:29047332-29046675 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 22-651
Cow position: chr14:44552246-44552850 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 23-651
Cow position: chr14:13620795-13620137 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 648

Conread position: 24-155
Cow position: chr14:43558329-43558464 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 68

Conread position: 24-399
Cow position: chr14:5512181-5512569 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 51

Conread position: 24-445
Cow position: chr14:190322-190760 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 122

Conread position: 24-464
Cow position: chr14:15275873-15275420 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 24-540
Cow position: chr14:11561672-11561136 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 508

Conread position: 24-551
Cow position: chr14:38531101-38530558 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 35

Conread position: 24-615
Cow position: chr14:32447151-32447755 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 24-626
Cow position: chr14:33393432-33392819 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 165

Conread position: 24-631
Cow position: chr14:33402046-33402666 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 153

Conread position: 24-636
Cow position: chr14:45189423-45188803 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 24-637
Cow position: chr14:13027672-13028281 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 387
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 20

Conread position: 24-641
Cow position: chr14:7472720-7473350 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 24-641
Cow position: chr14:11153807-11153151 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 181

Conread position: 24-641
Cow position: chr14:12742712-12742068 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-641
Cow position: chr14:13779314-13779950 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-642
Cow position: chr14:48601972-48601337 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 184

Conread position: 24-645
Cow position: chr14:37224546-37225191 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 640

Conread position: 24-651
Cow position: chr14:16919359-16918713 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 163

Conread position: 24-651
Cow position: chr14:17000704-17000052 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 527

Conread position: 24-651
Cow position: chr14:19327913-19327258 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 462

Conread position: 24-651
Cow position: chr14:20782817-20783472 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 24-651
Cow position: chr14:44581709-44582371 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 178

Conread position: 24-651
Cow position: chr14:45711360-45710717 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 194

Conread position: 25-646
Cow position: chr14:45206679-45207294 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 231

Conread position: 25-651
Cow position: chr14:12899458-12900101 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 25-651
Cow position: chr14:44775680-44775032 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 192

Conread position: 26-651
Cow position: chr14:12610807-12611435 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 30-641
Cow position: chr14:45081411-45082054 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 30-647
Cow position: chr14:16272935-16272293 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 438

Conread position: 31-651
Cow position: chr14:17760516-17759879 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 34-651
Cow position: chr14:38147367-38148007 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 374

Conread position: 43-536
Cow position: chr14:38229213-38228749 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 43-632
Cow position: chr14:44676493-44677093 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 102

Conread position: 44-617
Cow position: chr14:48825658-48826254 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 45-650
Cow position: chr14:46529600-46530215 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 50-645
Cow position: chr14:13273984-13274607 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 146

Conread position: 57-641
Cow position: chr14:50111180-50111800 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 123

Conread position: 59-336
Cow position: chr14:13461982-13462254 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 117

Conread position: 61-647
Cow position: chr14:30705917-30705306 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 412
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 50

Conread position: 80-614
Cow position: chr14:5074380-5074923 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 87-651
Cow position: chr14:40169294-40168727 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 91-651
Cow position: chr14:22031013-22030443 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 84

Conread position: 104-634
Cow position: chr14:9514846-9514301 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 365
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 11

Conread position: 107-372
Cow position: chr14:30735424-30735691 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 93

Conread position: 152-546
Cow position: chr14:37413256-37412854 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 123

Conread position: 159-504
Cow position: chr14:41409411-41409784 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 163-651
Cow position: chr14:43558737-43559241 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 27

Conread position: 166-630
Cow position: chr14:21744609-21745083 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 88

Conread position: 203-645
Cow position: chr14:10520952-10520504 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 68

Conread position: 204-487
Cow position: chr14:30666042-30666336 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 5

Conread position: 239-651
Cow position: chr14:10147448-10147883 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 368

Conread position: 246-650
Cow position: chr14:37984170-37984588 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 263
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 81

Conread position: 277-545
Cow position: chr14:33604352-33604633 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 67, 149

Conread position: 278-617
Cow position: chr14:13303587-13303922 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 61, 7

Conread position: 278-630
Cow position: chr14:39722327-39721982 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 7

Conread position: 280-651
Cow position: chr14:46637182-46637551 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 81

Conread position: 298-630
Cow position: chr14:44256113-44255775 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 42

Conread position: 322-570
Cow position: chr14:45162707-45162950 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 68

Conread position: 322-630
Cow position: chr14:44689737-44690054 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 0

Conread position: 322-651
Cow position: chr14:2294956-2295281 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 104

Conread position: 333-645
Cow position: chr14:47940297-47939994 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 42

Conread position: 340-532
Cow position: chr14:46657614-46657808 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 118

Conread position: 340-541
Cow position: chr14:47925579-47925783 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 340-651
Cow position: chr14:1659140-1659465 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 340-651
Cow position: chr14:46466379-46466680 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 47

Conread position: 342-651
Cow position: chr14:16343132-16342822 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 95

Conread position: 355-624
Cow position: chr14:48705108-48705371 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 61

Conread position: 355-647
Cow position: chr14:45678379-45678076 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 112

Conread position: 379-651
Cow position: chr14:29775357-29775069 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 218

Conread position: 380-645
Cow position: chr14:30735895-30736164 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 22, 119

Conread position: 390-651
Cow position: chr14:12124447-12124174 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 9, 206

Conread position: 400-630
Cow position: chr14:5513685-5513913 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 190

Conread position: 400-651
Cow position: chr14:13462269-13462528 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 19

Conread position: 428-647
Cow position: chr14:35385039-35384821 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 115

Conread position: 441-599
Cow position: chr14:15275060-15274898 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 148

Conread position: 453-645
Cow position: chr14:2951758-2951565 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 73

Conread position: 455-651
Cow position: chr14:23256551-23256355 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 92, 124

Conread position: 456-641
Cow position: chr14:17687309-17687496 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 56

Conread position: 457-630
Cow position: chr14:45086047-45086223 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 132

Conread position: 457-646
Cow position: chr14:37455107-37454925 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 463-641
Cow position: chr14:190855-191048 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 472-651
Cow position: chr14:13579214-13579396 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 116

Conread position: 496-647
Cow position: chr14:25365642-25365483 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 21

Show alignments to all cow chromosomes.