Cow genome map

Conread name: rret28_l8.y1

Conread position: 13-585
Cow position:
Alignm length: 598
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 145

Conread position: 18-291
Cow position:
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 188

Conread position: 20-286
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 55, 37

Conread position: 20-599
Cow position:
Alignm length: 608
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 20-646
Cow position:
Alignm length: 647
Alignm identity: 421
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 42, 57

Conread position: 21-500
Cow position:
Alignm length: 509
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 21-550
Cow position:
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 261

Conread position: 21-627
Cow position:
Alignm length: 639
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 154

Conread position: 21-630
Cow position:
Alignm length: 627
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 137

Conread position: 21-651
Cow position:
Alignm length: 672
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 313

Conread position: 21-651
Cow position:
Alignm length: 654
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 76

Conread position: 22-233
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 101

Conread position: 22-343
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 172

Conread position: 22-418
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 162

Conread position: 22-500
Cow position:
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 32

Conread position: 22-602
Cow position:
Alignm length: 612
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 162

Conread position: 22-616
Cow position:
Alignm length: 618
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-630
Cow position:
Alignm length: 637
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 22-645
Cow position:
Alignm length: 666
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 22-645
Cow position:
Alignm length: 663
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 463

Conread position: 22-650
Cow position:
Alignm length: 657
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 19

Conread position: 22-650
Cow position:
Alignm length: 654
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 254

Conread position: 22-651
Cow position:
Alignm length: 665
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 595

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 590

Conread position: 22-651
Cow position:
Alignm length: 673
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 604

Conread position: 22-651
Cow position:
Alignm length: 655
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 596

Conread position: 22-651
Cow position:
Alignm length: 654
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 417

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 22-651
Cow position:
Alignm length: 652
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 394

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 417

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 438

Conread position: 23-630
Cow position:
Alignm length: 633
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 152

Conread position: 23-641
Cow position:
Alignm length: 662
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 596

Conread position: 24-200
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 24-222
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 82

Conread position: 24-343
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 24-464
Cow position:
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 24-514
Cow position:
Alignm length: 506
Alignm identity: 334
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 132

Conread position: 24-543
Cow position:
Alignm length: 533
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 283

Conread position: 24-546
Cow position:
Alignm length: 546
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 122

Conread position: 24-583
Cow position:
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 294

Conread position: 24-625
Cow position:
Alignm length: 633
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-628
Cow position:
Alignm length: 634
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 137

Conread position: 24-630
Cow position:
Alignm length: 628
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 117

Conread position: 24-630
Cow position:
Alignm length: 633
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 24-636
Cow position:
Alignm length: 631
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 391

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 405

Conread position: 24-641
Cow position:
Alignm length: 642
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 356

Conread position: 24-641
Cow position:
Alignm length: 648
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 163

Conread position: 24-645
Cow position:
Alignm length: 634
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 24-646
Cow position:
Alignm length: 651
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 106

Conread position: 24-647
Cow position:
Alignm length: 665
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 24-647
Cow position:
Alignm length: 645
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-650
Cow position:
Alignm length: 648
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 459

Conread position: 24-651
Cow position:
Alignm length: 661
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 24-651
Cow position:
Alignm length: 662
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 448

Conread position: 24-651
Cow position:
Alignm length: 657
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 24-651
Cow position:
Alignm length: 660
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 419

Conread position: 24-651
Cow position:
Alignm length: 658
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 186

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 35

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 361

Conread position: 24-651
Cow position:
Alignm length: 677
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 59

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 24-651
Cow position:
Alignm length: 646
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 125

Conread position: 25-369
Cow position:
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 25-527
Cow position:
Alignm length: 519
Alignm identity: 333
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 48

Conread position: 25-535
Cow position:
Alignm length: 530
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 248

Conread position: 25-546
Cow position:
Alignm length: 537
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 69

Conread position: 25-651
Cow position:
Alignm length: 660
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 220

Conread position: 25-651
Cow position:
Alignm length: 656
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 29

Conread position: 26-641
Cow position:
Alignm length: 641
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 405

Conread position: 29-641
Cow position:
Alignm length: 640
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 29-651
Cow position:
Alignm length: 652
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 161

Conread position: 31-645
Cow position:
Alignm length: 640
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 32-645
Cow position:
Alignm length: 647
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 35-645
Cow position:
Alignm length: 633
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 419

Conread position: 43-616
Cow position:
Alignm length: 582
Alignm identity: 352
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 30

Conread position: 43-651
Cow position:
Alignm length: 628
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 11

Conread position: 54-648
Cow position:
Alignm length: 629
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 107

Conread position: 67-632
Cow position:
Alignm length: 582
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 76-651
Cow position:
Alignm length: 591
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 517

Conread position: 76-651
Cow position:
Alignm length: 589
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 233

Conread position: 85-651
Cow position:
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 230

Conread position: 98-534
Cow position:
Alignm length: 453
Alignm identity: 302
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 147, 95

Conread position: 104-494
Cow position:
Alignm length: 394
Alignm identity: 270
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 149, 7

Conread position: 104-546
Cow position:
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 93

Conread position: 118-651
Cow position:
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 443

Conread position: 120-490
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 179

Conread position: 127-630
Cow position:
Alignm length: 515
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 138

Conread position: 143-630
Cow position:
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 125

Conread position: 149-651
Cow position:
Alignm length: 522
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 333

Conread position: 163-580
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 286

Conread position: 164-630
Cow position:
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 124

Conread position: 164-651
Cow position:
Alignm length: 497
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 27

Conread position: 175-464
Cow position:
Alignm length: 294
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 162, 64

Conread position: 179-601
Cow position:
Alignm length: 440
Alignm identity: 290
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 181-630
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 326

Conread position: 183-645
Cow position:
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 195

Conread position: 192-629
Cow position:
Alignm length: 457
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 38

Conread position: 225-641
Cow position:
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 46

Conread position: 229-529
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 234-507
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 277

Conread position: 247-630
Cow position:
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 255-641
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 167

Conread position: 256-553
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 82

Conread position: 259-576
Cow position:
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 216

Conread position: 263-651
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 232

Conread position: 267-651
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 147

Conread position: 267-651
Cow position:
Alignm length: 399
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 118

Conread position: 282-630
Cow position:
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 283-569
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 21

Conread position: 291-630
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 16

Conread position: 298-647
Cow position:
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 174

Conread position: 320-641
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 326-651
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 50, 194

Conread position: 340-615
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 110

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 35, 84

Conread position: 341-641
Cow position:
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 254

Conread position: 342-630
Cow position:
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 143

Conread position: 345-651
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 57, 29

Conread position: 361-603
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 75

Conread position: 378-651
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 39

Conread position: 382-617
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 87

Conread position: 400-630
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 49

Conread position: 403-630
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 19

Conread position: 410-651
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 127, 53

Conread position: 413-651
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 170

Conread position: 414-648
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 416-647
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 32, 219

Conread position: 420-596
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 420-651
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 7

Conread position: 425-641
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 125

Conread position: 428-644
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 21

Conread position: 435-651
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 87

Conread position: 456-639
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 461-641
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 472-641
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 75, 126

Conread position: 472-645
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 175

Conread position: 479-651
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 68

Conread position: 484-650
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 507-651
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.