Cow genome map

Conread name: rret28_l8.y1

Conread position: 12-648
Cow position:
Alignm length: 691
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 187

Conread position: 18-516
Cow position:
Alignm length: 518
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 486

Conread position: 20-650
Cow position:
Alignm length: 648
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 21-599
Cow position:
Alignm length: 612
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 402

Conread position: 21-647
Cow position:
Alignm length: 663
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 21-651
Cow position:
Alignm length: 662
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 420

Conread position: 22-397
Cow position:
Alignm length: 384
Alignm identity: 228
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 186

Conread position: 22-580
Cow position:
Alignm length: 580
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 485

Conread position: 22-597
Cow position:
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 106

Conread position: 22-630
Cow position:
Alignm length: 628
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 337

Conread position: 22-645
Cow position:
Alignm length: 654
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 194

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 100

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 116

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 405

Conread position: 23-651
Cow position:
Alignm length: 675
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 504

Conread position: 24-188
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 39

Conread position: 24-196
Cow position:
Alignm length: 178
Alignm identity: 141
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 24-231
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 154

Conread position: 24-315
Cow position:
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-367
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 96

Conread position: 24-445
Cow position:
Alignm length: 434
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 80

Conread position: 24-540
Cow position:
Alignm length: 533
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 29

Conread position: 24-573
Cow position:
Alignm length: 572
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-599
Cow position:
Alignm length: 601
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-624
Cow position:
Alignm length: 635
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 594

Conread position: 24-625
Cow position:
Alignm length: 627
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 476

Conread position: 24-630
Cow position:
Alignm length: 629
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 24-630
Cow position:
Alignm length: 627
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 18

Conread position: 24-630
Cow position:
Alignm length: 636
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 105

Conread position: 24-630
Cow position:
Alignm length: 633
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-630
Cow position:
Alignm length: 634
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 411

Conread position: 24-641
Cow position:
Alignm length: 649
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 24-641
Cow position:
Alignm length: 647
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 24-641
Cow position:
Alignm length: 647
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 508

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-641
Cow position:
Alignm length: 642
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 24-645
Cow position:
Alignm length: 647
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 449

Conread position: 24-645
Cow position:
Alignm length: 648
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 417

Conread position: 24-645
Cow position:
Alignm length: 658
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 242

Conread position: 24-648
Cow position:
Alignm length: 648
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 283

Conread position: 24-651
Cow position:
Alignm length: 669
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 155

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 655
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 443

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 388

Conread position: 25-367
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 25-630
Cow position:
Alignm length: 632
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 31-651
Cow position:
Alignm length: 643
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 407

Conread position: 32-234
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 11

Conread position: 32-648
Cow position:
Alignm length: 632
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 306

Conread position: 36-648
Cow position:
Alignm length: 632
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 44-645
Cow position:
Alignm length: 623
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 417

Conread position: 51-342
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 62-651
Cow position:
Alignm length: 619
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 86-598
Cow position:
Alignm length: 540
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 91-599
Cow position:
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 209

Conread position: 122-617
Cow position:
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 15

Conread position: 124-651
Cow position:
Alignm length: 543
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 479

Conread position: 127-523
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 46

Conread position: 148-651
Cow position:
Alignm length: 525
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 229

Conread position: 163-651
Cow position:
Alignm length: 513
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 297

Conread position: 167-642
Cow position:
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 313

Conread position: 175-590
Cow position:
Alignm length: 428
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 143

Conread position: 175-651
Cow position:
Alignm length: 513
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 21

Conread position: 177-583
Cow position:
Alignm length: 428
Alignm identity: 286
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 85

Conread position: 177-651
Cow position:
Alignm length: 499
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 290

Conread position: 195-645
Cow position:
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 391

Conread position: 228-465
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 80

Conread position: 231-523
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 238-630
Cow position:
Alignm length: 408
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 241

Conread position: 270-583
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 31

Conread position: 275-651
Cow position:
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 326

Conread position: 318-546
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 20

Conread position: 322-650
Cow position:
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 328-647
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 119

Conread position: 330-651
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 308

Conread position: 339-645
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 120

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 258

Conread position: 340-651
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 81

Conread position: 340-651
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 53

Conread position: 342-651
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 76

Conread position: 343-651
Cow position:
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 345-644
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 16

Conread position: 363-651
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 38

Conread position: 374-599
Cow position:
Alignm length: 235
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 218

Conread position: 374-641
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 176

Conread position: 384-641
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 247

Conread position: 394-651
Cow position:
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 133

Conread position: 399-629
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 56, 16

Conread position: 400-651
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 47, 15

Conread position: 401-651
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 186

Conread position: 403-546
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 91

Conread position: 403-648
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 204

Conread position: 417-651
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 51

Conread position: 450-617
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 30

Conread position: 456-630
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 36

Conread position: 468-651
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 117

Conread position: 472-651
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 128

Conread position: 472-651
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 476-651
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 495-651
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 99

Show alignments to all cow chromosomes.