Cow genome map

Conread name: rret28_l8.y1

Conread position: 21-645
Cow position:
Alignm length: 654
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 22-343
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-372
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 301

Conread position: 22-536
Cow position:
Alignm length: 536
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 233

Conread position: 22-617
Cow position:
Alignm length: 623
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 449

Conread position: 22-630
Cow position:
Alignm length: 635
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 491

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 200

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 100

Conread position: 22-651
Cow position:
Alignm length: 664
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 32

Conread position: 22-651
Cow position:
Alignm length: 666
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 198

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 22-651
Cow position:
Alignm length: 666
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 387

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 56

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 592

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 433

Conread position: 23-651
Cow position:
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 23-651
Cow position:
Alignm length: 665
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 160

Conread position: 24-188
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 43

Conread position: 24-499
Cow position:
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 24-583
Cow position:
Alignm length: 573
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 301

Conread position: 24-598
Cow position:
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 18

Conread position: 24-624
Cow position:
Alignm length: 629
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 584

Conread position: 24-625
Cow position:
Alignm length: 631
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 24-630
Cow position:
Alignm length: 633
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 442

Conread position: 24-648
Cow position:
Alignm length: 657
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 108

Conread position: 24-648
Cow position:
Alignm length: 664
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 105

Conread position: 24-650
Cow position:
Alignm length: 649
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 447

Conread position: 24-651
Cow position:
Alignm length: 658
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 51

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 24-651
Cow position:
Alignm length: 662
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 521

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 179

Conread position: 24-651
Cow position:
Alignm length: 655
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 24-651
Cow position:
Alignm length: 658
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 460

Conread position: 25-406
Cow position:
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 154

Conread position: 25-641
Cow position:
Alignm length: 649
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 407

Conread position: 25-647
Cow position:
Alignm length: 650
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 363

Conread position: 26-278
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 153

Conread position: 26-545
Cow position:
Alignm length: 554
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 28-651
Cow position:
Alignm length: 655
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 163

Conread position: 30-197
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 53

Conread position: 31-372
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 31-647
Cow position:
Alignm length: 639
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 31-650
Cow position:
Alignm length: 644
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 12

Conread position: 33-615
Cow position:
Alignm length: 619
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 122

Conread position: 76-561
Cow position:
Alignm length: 495
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 82-640
Cow position:
Alignm length: 593
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 202

Conread position: 85-651
Cow position:
Alignm length: 587
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 64

Conread position: 91-641
Cow position:
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 60

Conread position: 93-650
Cow position:
Alignm length: 582
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 556

Conread position: 107-546
Cow position:
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 89

Conread position: 107-626
Cow position:
Alignm length: 552
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 384

Conread position: 118-651
Cow position:
Alignm length: 550
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 140

Conread position: 123-650
Cow position:
Alignm length: 543
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 133-630
Cow position:
Alignm length: 507
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 58

Conread position: 143-625
Cow position:
Alignm length: 495
Alignm identity: 309
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 48

Conread position: 162-649
Cow position:
Alignm length: 507
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 249

Conread position: 163-651
Cow position:
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 444

Conread position: 168-651
Cow position:
Alignm length: 516
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 198

Conread position: 229-641
Cow position:
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 247

Conread position: 232-602
Cow position:
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 69

Conread position: 256-651
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 195

Conread position: 284-639
Cow position:
Alignm length: 373
Alignm identity: 243
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 41

Conread position: 291-651
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 215

Conread position: 322-651
Cow position:
Alignm length: 342
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 91

Conread position: 340-651
Cow position:
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 340-651
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 374-651
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 193

Conread position: 385-651
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 206

Conread position: 395-630
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 209

Conread position: 398-648
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 69

Conread position: 399-651
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 11

Conread position: 413-650
Cow position:
Alignm length: 247
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 415-599
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 52

Conread position: 443-651
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 23

Conread position: 451-651
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 12

Conread position: 461-651
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 23

Conread position: 472-643
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 39

Show alignments to all cow chromosomes.