Cow genome map

Conread name: rret28_l8.y1

Conread position: 18-651
Cow position:
Alignm length: 670
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 7

Conread position: 21-272
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 21-283
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 12

Conread position: 21-616
Cow position:
Alignm length: 626
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 171

Conread position: 21-647
Cow position:
Alignm length: 655
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 362

Conread position: 22-140
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 22-527
Cow position:
Alignm length: 531
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 140

Conread position: 22-546
Cow position:
Alignm length: 546
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 162

Conread position: 22-616
Cow position:
Alignm length: 622
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 491

Conread position: 22-617
Cow position:
Alignm length: 637
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 607

Conread position: 22-647
Cow position:
Alignm length: 649
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 32

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-651
Cow position:
Alignm length: 664
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 462

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-651
Cow position:
Alignm length: 651
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 449

Conread position: 23-651
Cow position:
Alignm length: 650
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 323

Conread position: 24-182
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 46

Conread position: 24-354
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 190

Conread position: 24-445
Cow position:
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-532
Cow position:
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 24-587
Cow position:
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-634
Cow position:
Alignm length: 630
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 123

Conread position: 24-641
Cow position:
Alignm length: 639
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 24-641
Cow position:
Alignm length: 640
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-641
Cow position:
Alignm length: 641
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-641
Cow position:
Alignm length: 652
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 413

Conread position: 24-645
Cow position:
Alignm length: 644
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 193

Conread position: 24-647
Cow position:
Alignm length: 649
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 582

Conread position: 24-651
Cow position:
Alignm length: 657
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 333

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 406

Conread position: 24-651
Cow position:
Alignm length: 645
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 25-342
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 25-651
Cow position:
Alignm length: 654
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 410

Conread position: 31-387
Cow position:
Alignm length: 369
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 118

Conread position: 45-649
Cow position:
Alignm length: 617
Alignm identity: 378
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 30

Conread position: 53-534
Cow position:
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 101

Conread position: 76-651
Cow position:
Alignm length: 584
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 140

Conread position: 106-651
Cow position:
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 403

Conread position: 120-647
Cow position:
Alignm length: 552
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 131

Conread position: 149-641
Cow position:
Alignm length: 509
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 149

Conread position: 152-583
Cow position:
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 175-617
Cow position:
Alignm length: 463
Alignm identity: 308
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 163, 12

Conread position: 192-630
Cow position:
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 187

Conread position: 195-478
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 140

Conread position: 195-647
Cow position:
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 264

Conread position: 212-651
Cow position:
Alignm length: 466
Alignm identity: 306
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 37, 331

Conread position: 256-606
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 81

Conread position: 261-645
Cow position:
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 214

Conread position: 276-564
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 25

Conread position: 287-651
Cow position:
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 317-546
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 13

Conread position: 322-651
Cow position:
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 338-643
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 112

Conread position: 338-651
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 187

Conread position: 340-561
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 258

Conread position: 340-651
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 264

Conread position: 344-648
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 72

Conread position: 353-630
Cow position:
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 51

Conread position: 366-646
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 105

Conread position: 377-651
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 202

Conread position: 378-630
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 95

Conread position: 393-524
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 400-651
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 10

Conread position: 406-625
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 19

Conread position: 475-651
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 495-641
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 94

Show alignments to all cow chromosomes.