Cow genome map

Conread name: rret28_l8.y1

Conread position: 18-651
Cow position: chr19:50723335-50723998 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 7

Conread position: 21-272
Cow position: chr19:6548804-6549061 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 21-283
Cow position: chr19:53844385-53844651 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 12

Conread position: 21-616
Cow position: chr19:3138722-3139341 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 171

Conread position: 21-647
Cow position: chr19:28405908-28405259 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 362

Conread position: 22-140
Cow position: chr19:39668695-39668576 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 22-527
Cow position: chr19:75453-74942 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 140

Conread position: 22-546
Cow position: chr19:32182281-32181738 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 162

Conread position: 22-616
Cow position: chr19:43144507-43145126 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 491

Conread position: 22-617
Cow position: chr19:20105507-20106142 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 607

Conread position: 22-647
Cow position: chr19:135991-135351 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 32

Conread position: 22-651
Cow position: chr19:39093-39750 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-651
Cow position: chr19:773392-774053 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 462

Conread position: 22-651
Cow position: chr19:7342864-7343521 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-651
Cow position: chr19:28594348-28594987 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 449

Conread position: 23-651
Cow position: chr19:5900704-5900058 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 323

Conread position: 24-182
Cow position: chr19:40816768-40816607 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 46

Conread position: 24-354
Cow position: chr19:190174-190514 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 190

Conread position: 24-445
Cow position: chr19:33942404-33942847 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-532
Cow position: chr19:2273582-2273057 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 24-587
Cow position: chr19:32193813-32194410 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-634
Cow position: chr19:9707330-9706730 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 123

Conread position: 24-641
Cow position: chr19:4386426-4387053 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 24-641
Cow position: chr19:12773917-12774545 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-641
Cow position: chr19:28580859-28580231 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-641
Cow position: chr19:39391310-39391960 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 413

Conread position: 24-645
Cow position: chr19:892804-892189 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 193

Conread position: 24-647
Cow position: chr19:33874225-33874869 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 582

Conread position: 24-651
Cow position: chr19:32211276-32210624 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 333

Conread position: 24-651
Cow position: chr19:39184739-39184089 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 406

Conread position: 24-651
Cow position: chr19:40851640-40851012 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 25-342
Cow position: chr19:52151033-52150712 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 25-651
Cow position: chr19:438635-437983 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 410

Conread position: 31-387
Cow position: chr19:27051698-27051343 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 118

Conread position: 45-649
Cow position: chr19:5162871-5162273 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 378
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 30

Conread position: 53-534
Cow position: chr19:1656247-1656754 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 101

Conread position: 76-651
Cow position: chr19:1588361-1587794 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 140

Conread position: 106-651
Cow position: chr19:7489231-7489805 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 403

Conread position: 120-647
Cow position: chr19:35384709-35384170 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 131

Conread position: 149-641
Cow position: chr19:5729802-5730300 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 149

Conread position: 152-583
Cow position: chr19:167638-167179 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 175-617
Cow position: chr19:39096109-39096554 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 308
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 163, 12

Conread position: 192-630
Cow position: chr19:28366987-28367411 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 187

Conread position: 195-478
Cow position: chr19:23376800-23377085 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 140

Conread position: 195-647
Cow position: chr19:48861229-48860764 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 264

Conread position: 212-651
Cow position: chr19:25924319-25924779 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 306
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 37, 331

Conread position: 256-606
Cow position: chr19:6713672-6713327 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 81

Conread position: 261-645
Cow position: chr19:256307-256705 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 214

Conread position: 276-564
Cow position: chr19:32204349-32204649 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 25

Conread position: 287-651
Cow position: chr19:40816450-40816058 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 317-546
Cow position: chr19:32220498-32220267 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 13

Conread position: 322-651
Cow position: chr19:173367-173706 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 338-643
Cow position: chr19:40886594-40886291 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 112

Conread position: 338-651
Cow position: chr19:342365-342675 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 187

Conread position: 340-561
Cow position: chr19:24294238-24294467 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 340-651
Cow position: chr19:33527240-33527565 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 258

Conread position: 340-651
Cow position: chr19:52150557-52150231 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 264

Conread position: 344-648
Cow position: chr19:1489866-1489550 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 72

Conread position: 353-630
Cow position: chr19:39667389-39667111 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 51

Conread position: 366-646
Cow position: chr19:3173968-3174263 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 105

Conread position: 377-651
Cow position: chr19:33653559-33653278 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 202

Conread position: 378-630
Cow position: chr19:161967-161707 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 95

Conread position: 393-524
Cow position: chr19:27050980-27050846 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 400-651
Cow position: chr19:376529-376264 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 10

Conread position: 406-625
Cow position: chr19:21339522-21339295 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 19

Conread position: 475-651
Cow position: chr19:205771-205954 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 495-641
Cow position: chr19:33942857-33943012 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 94

Show alignments to all cow chromosomes.