Cow genome map

Conread name: rret28_l8.y1

Conread position: 17-615
Cow position:
Alignm length: 614
Alignm identity: 367
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 89

Conread position: 20-648
Cow position:
Alignm length: 657
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 87

Conread position: 21-235
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 93

Conread position: 21-338
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 21-467
Cow position:
Alignm length: 464
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 21-496
Cow position:
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 21-643
Cow position:
Alignm length: 650
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 22-389
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-559
Cow position:
Alignm length: 559
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 449

Conread position: 22-565
Cow position:
Alignm length: 566
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-580
Cow position:
Alignm length: 579
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 264

Conread position: 22-599
Cow position:
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 57

Conread position: 22-641
Cow position:
Alignm length: 649
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 22-645
Cow position:
Alignm length: 666
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 90

Conread position: 22-645
Cow position:
Alignm length: 653
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 254

Conread position: 22-645
Cow position:
Alignm length: 648
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 22-647
Cow position:
Alignm length: 654
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 179

Conread position: 22-651
Cow position:
Alignm length: 651
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 326

Conread position: 22-651
Cow position:
Alignm length: 665
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 154

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 168

Conread position: 22-651
Cow position:
Alignm length: 664
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 246

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 133

Conread position: 22-651
Cow position:
Alignm length: 654
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 89

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 254

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 55

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 591

Conread position: 22-651
Cow position:
Alignm length: 665
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 44

Conread position: 22-651
Cow position:
Alignm length: 653
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 622

Conread position: 22-651
Cow position:
Alignm length: 668
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 487

Conread position: 22-651
Cow position:
Alignm length: 654
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 52

Conread position: 23-630
Cow position:
Alignm length: 629
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 23-645
Cow position:
Alignm length: 640
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 272

Conread position: 23-651
Cow position:
Alignm length: 651
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 186

Conread position: 24-235
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 129

Conread position: 24-297
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 170

Conread position: 24-344
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 44

Conread position: 24-353
Cow position:
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 24-367
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 24-419
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 53, 194

Conread position: 24-423
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 150

Conread position: 24-536
Cow position:
Alignm length: 531
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-545
Cow position:
Alignm length: 545
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-546
Cow position:
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 124

Conread position: 24-552
Cow position:
Alignm length: 554
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 467

Conread position: 24-564
Cow position:
Alignm length: 556
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 24-583
Cow position:
Alignm length: 583
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 24-624
Cow position:
Alignm length: 626
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 434

Conread position: 24-630
Cow position:
Alignm length: 637
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 393

Conread position: 24-630
Cow position:
Alignm length: 634
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 176

Conread position: 24-630
Cow position:
Alignm length: 637
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 590

Conread position: 24-630
Cow position:
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 43

Conread position: 24-630
Cow position:
Alignm length: 652
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 469

Conread position: 24-630
Cow position:
Alignm length: 636
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 203

Conread position: 24-640
Cow position:
Alignm length: 645
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 213

Conread position: 24-641
Cow position:
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 19

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 125

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 106

Conread position: 24-641
Cow position:
Alignm length: 653
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 590

Conread position: 24-644
Cow position:
Alignm length: 652
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 24-645
Cow position:
Alignm length: 654
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 128

Conread position: 24-647
Cow position:
Alignm length: 656
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 176

Conread position: 24-651
Cow position:
Alignm length: 654
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 285

Conread position: 24-651
Cow position:
Alignm length: 669
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 465

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 44

Conread position: 24-651
Cow position:
Alignm length: 647
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 24-651
Cow position:
Alignm length: 654
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 117

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 357

Conread position: 24-651
Cow position:
Alignm length: 639
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 141

Conread position: 24-651
Cow position:
Alignm length: 656
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 42

Conread position: 25-382
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 222, 49

Conread position: 25-641
Cow position:
Alignm length: 650
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 25-651
Cow position:
Alignm length: 654
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 166

Conread position: 26-495
Cow position:
Alignm length: 488
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 273

Conread position: 30-630
Cow position:
Alignm length: 634
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 30-650
Cow position:
Alignm length: 656
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 284

Conread position: 30-651
Cow position:
Alignm length: 645
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 31-646
Cow position:
Alignm length: 642
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 43

Conread position: 43-445
Cow position:
Alignm length: 415
Alignm identity: 262
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 91

Conread position: 43-641
Cow position:
Alignm length: 627
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 250

Conread position: 43-651
Cow position:
Alignm length: 626
Alignm identity: 389
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 45

Conread position: 45-651
Cow position:
Alignm length: 628
Alignm identity: 392
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 118

Conread position: 51-611
Cow position:
Alignm length: 581
Alignm identity: 360
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 47

Conread position: 59-646
Cow position:
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 49

Conread position: 68-645
Cow position:
Alignm length: 606
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 54

Conread position: 74-645
Cow position:
Alignm length: 587
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 75-651
Cow position:
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 50

Conread position: 78-632
Cow position:
Alignm length: 576
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 198

Conread position: 104-445
Cow position:
Alignm length: 347
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 67

Conread position: 117-645
Cow position:
Alignm length: 554
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 129-646
Cow position:
Alignm length: 541
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 56

Conread position: 131-570
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 20

Conread position: 136-546
Cow position:
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 49

Conread position: 140-583
Cow position:
Alignm length: 467
Alignm identity: 298
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 43

Conread position: 140-583
Cow position:
Alignm length: 464
Alignm identity: 300
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 43

Conread position: 146-598
Cow position:
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 162-651
Cow position:
Alignm length: 509
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 30

Conread position: 167-630
Cow position:
Alignm length: 476
Alignm identity: 316
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 175, 66

Conread position: 170-350
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 29

Conread position: 175-599
Cow position:
Alignm length: 437
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 31

Conread position: 175-642
Cow position:
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 133

Conread position: 178-647
Cow position:
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 185

Conread position: 189-514
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 61, 275

Conread position: 208-644
Cow position:
Alignm length: 459
Alignm identity: 274
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 120, 313

Conread position: 214-650
Cow position:
Alignm length: 457
Alignm identity: 306
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 54

Conread position: 218-645
Cow position:
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 77

Conread position: 221-651
Cow position:
Alignm length: 449
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 233

Conread position: 244-651
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 100, 183

Conread position: 245-651
Cow position:
Alignm length: 430
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 99, 361

Conread position: 247-647
Cow position:
Alignm length: 415
Alignm identity: 271
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 144

Conread position: 265-647
Cow position:
Alignm length: 399
Alignm identity: 255
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 212

Conread position: 267-651
Cow position:
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 98

Conread position: 276-647
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 37

Conread position: 310-641
Cow position:
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 7

Conread position: 322-599
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 61

Conread position: 325-651
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 339-651
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 250

Conread position: 340-645
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 278

Conread position: 340-647
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 258

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 157

Conread position: 340-651
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 26

Conread position: 340-651
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 345-511
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 33, 46

Conread position: 362-508
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 13

Conread position: 362-651
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 225

Conread position: 376-599
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 378-651
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 396-640
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 396-645
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 151, 31

Conread position: 396-650
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 257

Conread position: 396-651
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 14

Conread position: 404-616
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 9

Conread position: 405-647
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 231

Conread position: 417-645
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 30

Conread position: 440-651
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 108, 12

Conread position: 446-651
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 20

Conread position: 450-651
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 132

Conread position: 455-651
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 150, 0

Conread position: 464-617
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 16

Conread position: 479-651
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 115

Conread position: 485-647
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 486-641
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 90

Conread position: 503-651
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 503-651
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 131

Conread position: 508-650
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 68

Show alignments to all cow chromosomes.