Cow genome map
| Conread name: | rret28_l8.y1 |
| Conread position: | 11-643 |
| Cow position: | chr20:35105507-35106186 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 436 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 13-643 |
| Cow position: | chr20:37580958-37581607 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 20-651 |
| Cow position: | chr20:10854594-10853931 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 21-647 |
| Cow position: | chr20:12569278-12569921 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 583 |
| Conread position: | 21-651 |
| Cow position: | chr20:23799638-23800295 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 510 |
| Conread position: | 22-367 |
| Cow position: | chr20:16105782-16105423 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 22-601 |
| Cow position: | chr20:8974062-8973462 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 443 |
| Conread position: | 22-641 |
| Cow position: | chr20:21394685-21395320 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 22-651 |
| Cow position: | chr20:15066240-15066878 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 136 |
| Conread position: | 24-304 |
| Cow position: | chr20:21915078-21915363 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 174 |
| Conread position: | 24-350 |
| Cow position: | chr20:22207880-22208207 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 172 |
| Conread position: | 24-372 |
| Cow position: | chr20:17661317-17660958 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-630 |
| Cow position: | chr20:13763667-13764283 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 154 |
| Conread position: | 24-630 |
| Cow position: | chr20:23468904-23468276 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 583 |
| Conread position: | 24-630 |
| Cow position: | chr20:27869962-27870594 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-633 |
| Cow position: | chr20:32349029-32349653 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 139 |
| Conread position: | 24-641 |
| Cow position: | chr20:35125254-35125898 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 166 |
| Conread position: | 24-643 |
| Cow position: | chr20:16178976-16178359 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 24-643 |
| Cow position: | chr20:28161578-28162211 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 442 |
| Conread position: | 24-645 |
| Cow position: | chr20:28564831-28564188 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 269 |
| Conread position: | 24-647 |
| Cow position: | chr20:15292764-15293388 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 24-647 |
| Cow position: | chr20:24616109-24615487 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 113 |
| Conread position: | 24-648 |
| Cow position: | chr20:14870189-14869554 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 24-651 |
| Cow position: | chr20:5535693-5536352 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-651 |
| Cow position: | chr20:15097117-15096481 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 24-651 |
| Cow position: | chr20:25850069-25849413 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 248 |
| Conread position: | 25-645 |
| Cow position: | chr20:8216276-8216910 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 30-524 |
| Cow position: | chr20:12437942-12437437 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 168 |
| Conread position: | 31-630 |
| Cow position: | chr20:18314574-18313975 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 44-651 |
| Cow position: | chr20:19438694-19439328 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 388 |
| Conread position: | 45-616 |
| Cow position: | chr20:28479491-28480049 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 397 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 215 |
| Conread position: | 65-630 |
| Cow position: | chr20:872161-871620 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 75-643 |
| Cow position: | chr20:13679233-13678641 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 123-447 |
| Cow position: | chr20:1742720-1743044 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 9, 133 |
| Conread position: | 127-617 |
| Cow position: | chr20:5465915-5466406 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 103 |
| Conread position: | 133-651 |
| Cow position: | chr20:5229635-5229107 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 356 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 157-651 |
| Cow position: | chr20:5791255-5791743 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 162-546 |
| Cow position: | chr20:2788239-2787850 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 193-649 |
| Cow position: | chr20:13786996-13787454 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 212-650 |
| Cow position: | chr20:27897094-27896622 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 321 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 238-651 |
| Cow position: | chr20:30686547-30686984 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 150 |
| Conread position: | 244-645 |
| Cow position: | chr20:13499096-13499510 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 91, 7 |
| Conread position: | 256-648 |
| Cow position: | chr20:13664049-13663640 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 108 |
| Conread position: | 261-630 |
| Cow position: | chr20:9343971-9344353 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 311-645 |
| Cow position: | chr20:20753718-20753394 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 340-650 |
| Cow position: | chr20:823860-824184 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 340-651 |
| Cow position: | chr20:9521045-9520724 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 341-630 |
| Cow position: | chr20:27338297-27338586 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 341-641 |
| Cow position: | chr20:29949607-29949909 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 341-651 |
| Cow position: | chr20:22210141-22210447 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 342-641 |
| Cow position: | chr20:21915721-21916038 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 357-651 |
| Cow position: | chr20:17660638-17660333 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 375-651 |
| Cow position: | chr20:30429395-30429683 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 27, 221 |
| Conread position: | 390-590 |
| Cow position: | chr20:40259440-40259647 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 416-630 |
| Cow position: | chr20:18967667-18967879 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 426-651 |
| Cow position: | chr20:9546849-9547068 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 178, 13 |
| Conread position: | 443-648 |
| Cow position: | chr20:32120530-32120742 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 462-651 |
| Cow position: | chr20:19340854-19341049 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 511-641 |
| Cow position: | chr20:12437158-12437019 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 82 |
Show alignments to all cow chromosomes.