Cow genome map

Conread name: rret28_l8.y1

Conread position: 21-464
Cow position: chr22:44350964-44350504 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 107

Conread position: 21-617
Cow position: chr22:37267858-37268482 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 244

Conread position: 21-650
Cow position: chr22:8737616-8736991 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 21-651
Cow position: chr22:3277661-3277004 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 137

Conread position: 22-420
Cow position: chr22:24950796-24951210 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 327

Conread position: 22-463
Cow position: chr22:44368928-44368458 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 22-628
Cow position: chr22:522695-522068 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 195

Conread position: 22-641
Cow position: chr22:36184456-36185100 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 381

Conread position: 22-650
Cow position: chr22:1322915-1323551 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 172

Conread position: 22-650
Cow position: chr22:27309077-27308422 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-651
Cow position: chr22:326470-325841 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 101

Conread position: 22-651
Cow position: chr22:537799-538460 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 388

Conread position: 22-651
Cow position: chr22:1879492-1880157 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 499

Conread position: 22-651
Cow position: chr22:2395296-2394633 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 235

Conread position: 22-651
Cow position: chr22:6021361-6022008 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 577

Conread position: 22-651
Cow position: chr22:10909138-10908483 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 411

Conread position: 22-651
Cow position: chr22:11804358-11803698 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 593

Conread position: 22-651
Cow position: chr22:18027980-18028641 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 493

Conread position: 22-651
Cow position: chr22:20240144-20239486 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 597

Conread position: 22-651
Cow position: chr22:44491732-44492408 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 254

Conread position: 24-232
Cow position: chr22:36129615-36129828 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 24-235
Cow position: chr22:28659661-28659444 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 24-350
Cow position: chr22:18815679-18815348 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-415
Cow position: chr22:41240074-41240474 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 277

Conread position: 24-510
Cow position: chr22:15313248-15312746 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 24-543
Cow position: chr22:11032453-11032988 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 24-569
Cow position: chr22:45930378-45930932 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 51

Conread position: 24-583
Cow position: chr22:3802889-3803464 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 241

Conread position: 24-630
Cow position: chr22:9044839-9045457 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 48

Conread position: 24-641
Cow position: chr22:1520319-1519677 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 147

Conread position: 24-641
Cow position: chr22:17327754-17327115 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 242

Conread position: 24-641
Cow position: chr22:31334334-31333701 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 164

Conread position: 24-641
Cow position: chr22:44397151-44397774 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 24-641
Cow position: chr22:44934685-44935311 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 92

Conread position: 24-645
Cow position: chr22:290999-290354 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 125

Conread position: 24-645
Cow position: chr22:36860829-36860190 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 145

Conread position: 24-650
Cow position: chr22:21590038-21590681 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 440

Conread position: 24-651
Cow position: chr22:560000-559356 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 24-651
Cow position: chr22:6332420-6333062 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 92

Conread position: 24-651
Cow position: chr22:34169039-34169689 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 580

Conread position: 24-651
Cow position: chr22:37292969-37292325 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 497

Conread position: 24-651
Cow position: chr22:39468820-39468165 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 488

Conread position: 24-651
Cow position: chr22:42991880-42992525 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 25-419
Cow position: chr22:31314048-31314454 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 391

Conread position: 25-647
Cow position: chr22:19142988-19142333 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 444

Conread position: 26-477
Cow position: chr22:44457758-44458227 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 26-602
Cow position: chr22:36269917-36270498 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 257

Conread position: 29-616
Cow position: chr22:46581031-46580408 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 37

Conread position: 31-513
Cow position: chr22:41418590-41418116 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 31-651
Cow position: chr22:694329-694969 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 170

Conread position: 36-328
Cow position: chr22:6142669-6142377 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 201

Conread position: 43-546
Cow position: chr22:37140627-37141140 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 43-583
Cow position: chr22:12730961-12730406 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 11

Conread position: 60-647
Cow position: chr22:6502402-6501794 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 103

Conread position: 63-647
Cow position: chr22:1281983-1281385 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 72-551
Cow position: chr22:37133405-37133899 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 56

Conread position: 106-651
Cow position: chr22:16201714-16202266 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 328

Conread position: 108-649
Cow position: chr22:3273389-3272824 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 295

Conread position: 114-546
Cow position: chr22:44477406-44477863 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 371

Conread position: 142-597
Cow position: chr22:5937331-5936857 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 147-646
Cow position: chr22:35906556-35906048 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 166-500
Cow position: chr22:46612722-46613057 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 115

Conread position: 171-615
Cow position: chr22:15053572-15054021 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 272
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 164, 80

Conread position: 176-647
Cow position: chr22:316372-316855 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 62

Conread position: 209-651
Cow position: chr22:6602318-6601887 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 86

Conread position: 225-646
Cow position: chr22:40370357-40370786 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 32, 172

Conread position: 243-626
Cow position: chr22:19319938-19320338 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 364

Conread position: 251-651
Cow position: chr22:19536483-19536897 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 184

Conread position: 261-651
Cow position: chr22:13773471-13773869 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 252

Conread position: 275-616
Cow position: chr22:30677726-30677371 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 136

Conread position: 282-637
Cow position: chr22:34600314-34600679 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 55, 131

Conread position: 287-630
Cow position: chr22:40378696-40379050 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 11

Conread position: 305-648
Cow position: chr22:24536755-24537105 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 9

Conread position: 310-647
Cow position: chr22:1268765-1268404 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 311-645
Cow position: chr22:33351683-33352014 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 66

Conread position: 320-616
Cow position: chr22:13547761-13547460 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 245

Conread position: 322-651
Cow position: chr22:21195474-21195148 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 49

Conread position: 340-576
Cow position: chr22:284041-283798 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 193

Conread position: 340-647
Cow position: chr22:8121050-8120732 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 252

Conread position: 340-650
Cow position: chr22:45581956-45582266 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 62, 51

Conread position: 340-651
Cow position: chr22:3305547-3305246 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 125

Conread position: 341-630
Cow position: chr22:21035357-21035063 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 250

Conread position: 342-641
Cow position: chr22:18815333-18815022 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 251

Conread position: 377-651
Cow position: chr22:23801131-23800864 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 55

Conread position: 394-651
Cow position: chr22:7304568-7304301 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 53, 100

Conread position: 419-651
Cow position: chr22:24951667-24951910 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 176

Conread position: 425-645
Cow position: chr22:15852534-15852763 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 42

Conread position: 439-630
Cow position: chr22:44348721-44348531 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 165, 18

Conread position: 445-617
Cow position: chr22:46585426-46585250 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 144

Conread position: 453-651
Cow position: chr22:44368325-44368129 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 40

Conread position: 473-617
Cow position: chr22:26536222-26536371 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 484-651
Cow position: chr22:46614481-46614652 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 150

Show alignments to all cow chromosomes.