Cow genome map

Conread name: rret28_l8.y1

Conread position: 20-651
Cow position:
Alignm length: 649
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 161

Conread position: 21-336
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 47

Conread position: 21-558
Cow position:
Alignm length: 554
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 21-631
Cow position:
Alignm length: 624
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 131

Conread position: 21-646
Cow position:
Alignm length: 648
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 21-651
Cow position:
Alignm length: 661
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 41

Conread position: 22-307
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 53, 158

Conread position: 22-529
Cow position:
Alignm length: 529
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 22-546
Cow position:
Alignm length: 542
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 22-558
Cow position:
Alignm length: 566
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 148

Conread position: 22-643
Cow position:
Alignm length: 655
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 23-643
Cow position:
Alignm length: 640
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 236

Conread position: 23-651
Cow position:
Alignm length: 665
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 24-304
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 24-322
Cow position:
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 24-421
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 24-447
Cow position:
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-465
Cow position:
Alignm length: 462
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 137

Conread position: 24-512
Cow position:
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 161

Conread position: 24-617
Cow position:
Alignm length: 628
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 24-630
Cow position:
Alignm length: 643
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-640
Cow position:
Alignm length: 645
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 104

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 171

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-641
Cow position:
Alignm length: 647
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-645
Cow position:
Alignm length: 653
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 238

Conread position: 24-645
Cow position:
Alignm length: 652
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 415

Conread position: 24-647
Cow position:
Alignm length: 639
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 24-651
Cow position:
Alignm length: 659
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 209

Conread position: 24-651
Cow position:
Alignm length: 647
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 166

Conread position: 25-462
Cow position:
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 29

Conread position: 30-645
Cow position:
Alignm length: 653
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 32-651
Cow position:
Alignm length: 631
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 220

Conread position: 43-630
Cow position:
Alignm length: 613
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 443

Conread position: 49-591
Cow position:
Alignm length: 568
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 338

Conread position: 57-651
Cow position:
Alignm length: 621
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 65-614
Cow position:
Alignm length: 576
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 120

Conread position: 66-643
Cow position:
Alignm length: 589
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 84

Conread position: 67-530
Cow position:
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 75-630
Cow position:
Alignm length: 576
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 129

Conread position: 96-630
Cow position:
Alignm length: 547
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 44

Conread position: 106-645
Cow position:
Alignm length: 558
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 69

Conread position: 108-558
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 68

Conread position: 127-630
Cow position:
Alignm length: 523
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 14

Conread position: 131-641
Cow position:
Alignm length: 520
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 145

Conread position: 142-646
Cow position:
Alignm length: 518
Alignm identity: 325
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 210, 90

Conread position: 164-648
Cow position:
Alignm length: 508
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 109

Conread position: 173-651
Cow position:
Alignm length: 496
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 240

Conread position: 200-372
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 209-645
Cow position:
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 250

Conread position: 256-558
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 156

Conread position: 261-646
Cow position:
Alignm length: 419
Alignm identity: 293
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 77, 320

Conread position: 322-602
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 158

Conread position: 322-630
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 323-647
Cow position:
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 127

Conread position: 333-599
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 124

Conread position: 337-645
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 133

Conread position: 340-645
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 36, 239

Conread position: 340-647
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 22

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 258

Conread position: 340-651
Cow position:
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 260

Conread position: 340-651
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 157

Conread position: 341-651
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 343-651
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 178

Conread position: 357-578
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 113

Conread position: 387-647
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 29

Conread position: 398-645
Cow position:
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 192

Conread position: 407-651
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 410-649
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 197

Conread position: 443-630
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 99, 6

Conread position: 455-651
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 11

Conread position: 472-648
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 487-650
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 107

Show alignments to all cow chromosomes.