Cow genome map
| Conread name: | rret28_l8.y1 |
| Conread position: | 20-651 |
| Cow position: | chr23:22146602-22145961 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 161 |
| Conread position: | 21-336 |
| Cow position: | chr23:14778464-14778149 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 21-558 |
| Cow position: | chr23:28025368-28025906 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 21-631 |
| Cow position: | chr23:618761-618150 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 131 |
| Conread position: | 21-646 |
| Cow position: | chr23:16498530-16497894 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 21-651 |
| Cow position: | chr23:2758591-2759246 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 22-307 |
| Cow position: | chr23:4360507-4360797 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 53, 158 |
| Conread position: | 22-529 |
| Cow position: | chr23:27971240-27971753 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 22-546 |
| Cow position: | chr23:23171199-23171740 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 22-558 |
| Cow position: | chr23:28367824-28367271 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 22-643 |
| Cow position: | chr23:1023255-1022615 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 153 |
| Conread position: | 22-651 |
| Cow position: | chr23:1013089-1012453 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 115 |
| Conread position: | 22-651 |
| Cow position: | chr23:3706820-3707474 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 23-643 |
| Cow position: | chr23:29451641-29451009 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 236 |
| Conread position: | 23-651 |
| Cow position: | chr23:19949897-19949237 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 24-304 |
| Cow position: | chr23:28914097-28914381 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 24-322 |
| Cow position: | chr23:7336822-7337126 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 24-421 |
| Cow position: | chr23:15219203-15218787 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-447 |
| Cow position: | chr23:2717094-2717531 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 24-465 |
| Cow position: | chr23:16614735-16614279 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 24-512 |
| Cow position: | chr23:4639921-4639422 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 161 |
| Conread position: | 24-617 |
| Cow position: | chr23:19490244-19490865 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 24-630 |
| Cow position: | chr23:27400208-27400850 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-640 |
| Cow position: | chr23:11779488-11780121 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 24-641 |
| Cow position: | chr23:2026378-2025741 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 171 |
| Conread position: | 24-641 |
| Cow position: | chr23:3880378-3879747 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 24-641 |
| Cow position: | chr23:4817723-4818366 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 24-641 |
| Cow position: | chr23:4889386-4890030 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-645 |
| Cow position: | chr23:15876870-15876227 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 238 |
| Conread position: | 24-645 |
| Cow position: | chr23:20155518-20154877 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 415 |
| Conread position: | 24-647 |
| Cow position: | chr23:13510362-13510963 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 24-651 |
| Cow position: | chr23:15177776-15178417 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 24-651 |
| Cow position: | chr23:15526269-15526922 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 209 |
| Conread position: | 24-651 |
| Cow position: | chr23:36030672-36030037 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 25-462 |
| Cow position: | chr23:1401805-1401384 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 29 |
| Conread position: | 30-645 |
| Cow position: | chr23:2341785-2342422 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 32-651 |
| Cow position: | chr23:25683227-25682617 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 220 |
| Conread position: | 43-630 |
| Cow position: | chr23:965777-965171 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 443 |
| Conread position: | 49-591 |
| Cow position: | chr23:2781243-2780678 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 338 |
| Conread position: | 57-651 |
| Cow position: | chr23:5873832-5873223 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 65-614 |
| Cow position: | chr23:6219994-6220558 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 120 |
| Conread position: | 66-643 |
| Cow position: | chr23:15042001-15041428 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 67-530 |
| Cow position: | chr23:7369290-7369748 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 75-630 |
| Cow position: | chr23:2576178-2576733 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 96-630 |
| Cow position: | chr23:38581516-38582031 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 44 |
| Conread position: | 106-645 |
| Cow position: | chr23:14964256-14963710 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 69 |
| Conread position: | 108-558 |
| Cow position: | chr23:28078441-28078892 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 127-630 |
| Cow position: | chr23:29402911-29402395 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 131-641 |
| Cow position: | chr23:1956715-1957221 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 145 |
| Conread position: | 142-646 |
| Cow position: | chr23:18127455-18126947 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 210, 90 |
| Conread position: | 164-648 |
| Cow position: | chr23:5739510-5739009 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 173-651 |
| Cow position: | chr23:13511964-13512454 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 240 |
| Conread position: | 200-372 |
| Cow position: | chr23:2440973-2440794 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 209-645 |
| Cow position: | chr23:2794366-2793919 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 250 |
| Conread position: | 256-558 |
| Cow position: | chr23:28108616-28108925 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 61, 156 |
| Conread position: | 261-646 |
| Cow position: | chr23:31649099-31648687 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 77, 320 |
| Conread position: | 322-602 |
| Cow position: | chr23:26159703-26159412 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 158 |
| Conread position: | 322-630 |
| Cow position: | chr23:14972963-14972648 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 323-647 |
| Cow position: | chr23:21243727-21243397 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 333-599 |
| Cow position: | chr23:38669838-38669565 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 337-645 |
| Cow position: | chr23:30237294-30237611 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 133 |
| Conread position: | 340-645 |
| Cow position: | chr23:14777929-14777616 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 36, 239 |
| Conread position: | 340-647 |
| Cow position: | chr23:22167702-22168012 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 340-651 |
| Cow position: | chr23:14923270-14922945 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 258 |
| Conread position: | 340-651 |
| Cow position: | chr23:28218447-28218774 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 260 |
| Conread position: | 340-651 |
| Cow position: | chr23:41142201-41141878 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 36, 157 |
| Conread position: | 341-651 |
| Cow position: | chr23:4361054-4361374 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 149 |
| Conread position: | 343-651 |
| Cow position: | chr23:780986-780674 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 178 |
| Conread position: | 357-578 |
| Cow position: | chr23:22943102-22942876 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 387-647 |
| Cow position: | chr23:37716582-37716852 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 398-645 |
| Cow position: | chr23:11077093-11076841 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 192 |
| Conread position: | 407-651 |
| Cow position: | chr23:23282326-23282581 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 410-649 |
| Cow position: | chr23:19451249-19451494 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 197 |
| Conread position: | 443-630 |
| Cow position: | chr23:16054915-16055103 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 99, 6 |
| Conread position: | 455-651 |
| Cow position: | chr23:11714723-11714517 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 472-648 |
| Cow position: | chr23:16614011-16613829 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 487-650 |
| Cow position: | chr23:38691668-38691841 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 107 |
Show alignments to all cow chromosomes.