Cow genome map
| Conread name: | rret28_l8.y1 |
| Conread position: | 11-642 |
| Cow position: | chr24:5888451-5887824 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 393 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 21-599 |
| Cow position: | chr24:12109924-12109333 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 101 |
| Conread position: | 21-630 |
| Cow position: | chr24:6659708-6659086 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 170 |
| Conread position: | 21-651 |
| Cow position: | chr24:6435262-6435922 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 273 |
| Conread position: | 22-318 |
| Cow position: | chr24:40193300-40193599 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 285 |
| Conread position: | 22-339 |
| Cow position: | chr24:43814549-43814871 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 22-537 |
| Cow position: | chr24:6332912-6332381 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 439 |
| Conread position: | 22-608 |
| Cow position: | chr24:6024319-6023716 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 22-637 |
| Cow position: | chr24:6084853-6085475 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 210 |
| Conread position: | 22-651 |
| Cow position: | chr24:5992440-5991786 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 22-651 |
| Cow position: | chr24:9187949-9187303 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 325 |
| Conread position: | 22-651 |
| Cow position: | chr24:12700032-12699385 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 333 |
| Conread position: | 22-651 |
| Cow position: | chr24:13188956-13189618 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 166 |
| Conread position: | 22-651 |
| Cow position: | chr24:13233039-13233697 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 22-651 |
| Cow position: | chr24:23505080-23504421 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 592 |
| Conread position: | 22-651 |
| Cow position: | chr24:29305536-29304874 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 595 |
| Conread position: | 24-289 |
| Cow position: | chr24:14383805-14383538 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 24-583 |
| Cow position: | chr24:17696185-17695614 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 24-590 |
| Cow position: | chr24:12334972-12334385 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 583 |
| Conread position: | 24-616 |
| Cow position: | chr24:22971879-22972491 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 581 |
| Conread position: | 24-617 |
| Cow position: | chr24:8151474-8150887 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 24-617 |
| Cow position: | chr24:29188077-29188693 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-624 |
| Cow position: | chr24:6406816-6407442 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 446 |
| Conread position: | 24-630 |
| Cow position: | chr24:147823-147199 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 288 |
| Conread position: | 24-630 |
| Cow position: | chr24:14871527-14870914 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 24-645 |
| Cow position: | chr24:9544851-9545488 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 220 |
| Conread position: | 24-647 |
| Cow position: | chr24:4414745-4414100 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 24-647 |
| Cow position: | chr24:36558988-36558341 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 24-651 |
| Cow position: | chr24:6337171-6337829 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 245 |
| Conread position: | 24-651 |
| Cow position: | chr24:12086993-12087643 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 24-651 |
| Cow position: | chr24:19834177-19834844 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 24-651 |
| Cow position: | chr24:33934161-33934824 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-651 |
| Cow position: | chr24:44018320-44018947 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 207 |
| Conread position: | 25-331 |
| Cow position: | chr24:29182937-29183250 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 25-625 |
| Cow position: | chr24:12150532-12149901 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 25-647 |
| Cow position: | chr24:7090183-7089537 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 25-651 |
| Cow position: | chr24:9091256-9090619 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 25-651 |
| Cow position: | chr24:38638323-38638964 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 30-491 |
| Cow position: | chr24:6059693-6060168 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 43-645 |
| Cow position: | chr24:14389737-14389105 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 57-336 |
| Cow position: | chr24:11866429-11866144 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 81-648 |
| Cow position: | chr24:1450306-1450848 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 17 |
| Conread position: | 85-651 |
| Cow position: | chr24:34494308-34493747 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 258 |
| Conread position: | 106-642 |
| Cow position: | chr24:6141954-6142506 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 118-625 |
| Cow position: | chr24:12238181-12238695 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 163 |
| Conread position: | 121-608 |
| Cow position: | chr24:14881707-14881219 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 331 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 210, 30 |
| Conread position: | 140-644 |
| Cow position: | chr24:16097461-16097954 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 134 |
| Conread position: | 152-651 |
| Cow position: | chr24:6129754-6130259 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 169-617 |
| Cow position: | chr24:17321640-17322108 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 347 |
| Conread position: | 189-651 |
| Cow position: | chr24:17371005-17370552 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 190-587 |
| Cow position: | chr24:13044674-13044271 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 151 |
| Conread position: | 228-651 |
| Cow position: | chr24:6353157-6353574 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 27 |
| Conread position: | 247-630 |
| Cow position: | chr24:6668791-6668411 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 250-632 |
| Cow position: | chr24:35841051-35840653 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 299 |
| Conread position: | 257-651 |
| Cow position: | chr24:35869530-35869128 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 114 |
| Conread position: | 261-643 |
| Cow position: | chr24:37320556-37320172 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 68, 194 |
| Conread position: | 310-651 |
| Cow position: | chr24:12163026-12163382 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 319-651 |
| Cow position: | chr24:14383543-14383201 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 276 |
| Conread position: | 322-647 |
| Cow position: | chr24:14754784-14755106 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 17, 185 |
| Conread position: | 322-651 |
| Cow position: | chr24:19702596-19702933 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 142 |
| Conread position: | 334-616 |
| Cow position: | chr24:19640794-19641077 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 340-591 |
| Cow position: | chr24:17409595-17409847 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 340-616 |
| Cow position: | chr24:16083912-16083627 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 36, 258 |
| Conread position: | 340-626 |
| Cow position: | chr24:30430729-30431022 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 258 |
| Conread position: | 340-651 |
| Cow position: | chr24:7062657-7062981 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 341-651 |
| Cow position: | chr24:6060316-6060631 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 121 |
| Conread position: | 374-651 |
| Cow position: | chr24:11152088-11151798 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 403-651 |
| Cow position: | chr24:40101712-40101461 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 414-634 |
| Cow position: | chr24:17300710-17300488 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 30, 212 |
| Conread position: | 424-630 |
| Cow position: | chr24:36709781-36709996 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 159 |
| Conread position: | 443-630 |
| Cow position: | chr24:13301586-13301391 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 443-651 |
| Cow position: | chr24:16561103-16560879 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 443-651 |
| Cow position: | chr24:38585898-38585684 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 203 |
| Conread position: | 493-645 |
| Cow position: | chr24:25437566-25437724 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 498-651 |
| Cow position: | chr24:10222893-10222735 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 131 |
Show alignments to all cow chromosomes.