Cow genome map
| Conread name: | rret28_l8.y1 |
| Conread position: | 21-647 |
| Cow position: | chr25:18274025-18273374 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 22-651 |
| Cow position: | chr25:17588811-17588155 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 102 |
| Conread position: | 22-651 |
| Cow position: | chr25:18193017-18192359 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 597 |
| Conread position: | 22-651 |
| Cow position: | chr25:27021839-27021189 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 538 |
| Conread position: | 24-221 |
| Cow position: | chr25:26279991-26280193 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-593 |
| Cow position: | chr25:3377480-3376900 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 259 |
| Conread position: | 24-616 |
| Cow position: | chr25:18450067-18450664 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 162 |
| Conread position: | 24-647 |
| Cow position: | chr25:20630377-20631021 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 388 |
| Conread position: | 24-651 |
| Cow position: | chr25:13781781-13782431 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 460 |
| Conread position: | 24-651 |
| Cow position: | chr25:18888996-18888347 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 289 |
| Conread position: | 24-651 |
| Cow position: | chr25:22148287-22148928 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 439 |
| Conread position: | 24-651 |
| Cow position: | chr25:25507451-25508103 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 179 |
| Conread position: | 24-651 |
| Cow position: | chr25:34346267-34345598 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 25-647 |
| Cow position: | chr25:12758340-12757695 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 462 |
| Conread position: | 29-651 |
| Cow position: | chr25:24659446-24658816 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 51-651 |
| Cow position: | chr25:20774600-20773970 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 463 |
| Conread position: | 59-632 |
| Cow position: | chr25:26928098-26928683 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 127 |
| Conread position: | 100-646 |
| Cow position: | chr25:24216632-24216081 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 218 |
| Conread position: | 114-437 |
| Cow position: | chr25:33259268-33259593 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 224, 81 |
| Conread position: | 116-641 |
| Cow position: | chr25:12941825-12941280 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 82 |
| Conread position: | 117-630 |
| Cow position: | chr25:18252033-18251543 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 354 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 221, 55 |
| Conread position: | 132-647 |
| Cow position: | chr25:18305011-18305532 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 43 |
| Conread position: | 134-641 |
| Cow position: | chr25:19921414-19921913 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 343 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 209, 116 |
| Conread position: | 165-649 |
| Cow position: | chr25:18177590-18178085 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 295 |
| Conread position: | 217-649 |
| Cow position: | chr25:30266445-30266890 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 191 |
| Conread position: | 238-651 |
| Cow position: | chr25:11931811-11931386 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 255-645 |
| Cow position: | chr25:15364940-15365339 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 290-569 |
| Cow position: | chr25:34506670-34506375 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 310-650 |
| Cow position: | chr25:17655478-17655838 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 317-614 |
| Cow position: | chr25:26899739-26900042 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 319-634 |
| Cow position: | chr25:33576128-33575799 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 55, 273 |
| Conread position: | 322-651 |
| Cow position: | chr25:14957390-14957049 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 341-641 |
| Cow position: | chr25:11041444-11041748 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 288 |
| Conread position: | 410-651 |
| Cow position: | chr25:13693519-13693267 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 420-651 |
| Cow position: | chr25:18486385-18486156 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 184, 16 |
| Conread position: | 443-651 |
| Cow position: | chr25:21902221-21902435 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 455-651 |
| Cow position: | chr25:13062514-13062309 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 87, 139 |
| Conread position: | 477-647 |
| Cow position: | chr25:27523379-27523211 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 127, 66 |
Show alignments to all cow chromosomes.