Cow genome map

Conread name: rret28_l8.y1

Conread position: 21-645
Cow position: chr27:28892299-28892942 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 67

Conread position: 22-651
Cow position: chr27:16033694-16033053 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 256

Conread position: 23-158
Cow position: chr27:27752509-27752370 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 54

Conread position: 24-143
Cow position: chr27:893916-894040 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 24-229
Cow position: chr27:27663674-27663879 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 51, 43

Conread position: 24-336
Cow position: chr27:26554960-26554653 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 24-463
Cow position: chr27:30273502-30273044 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-464
Cow position: chr27:15036885-15036433 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 24-625
Cow position: chr27:14459748-14459117 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 24-647
Cow position: chr27:3234834-3234176 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 92

Conread position: 24-647
Cow position: chr27:9330430-9331079 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 446

Conread position: 24-650
Cow position: chr27:9992495-9991847 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-651
Cow position: chr27:15636645-15635997 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 617

Conread position: 24-651
Cow position: chr27:26325775-26326411 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 471

Conread position: 25-353
Cow position: chr27:23335868-23336196 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 25-651
Cow position: chr27:1210059-1210704 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 165

Conread position: 26-354
Cow position: chr27:5911572-5911906 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 33-630
Cow position: chr27:27195909-27195325 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 77-445
Cow position: chr27:26036032-26035651 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 45

Conread position: 107-651
Cow position: chr27:13898117-13898664 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 83

Conread position: 200-651
Cow position: chr27:1677688-1677217 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 141

Conread position: 228-651
Cow position: chr27:27663909-27664351 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 307

Conread position: 260-641
Cow position: chr27:25057862-25058257 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 199

Conread position: 261-551
Cow position: chr27:8568157-8568454 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 120

Conread position: 265-645
Cow position: chr27:21286944-21286542 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 262
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 224

Conread position: 304-498
Cow position: chr27:12747829-12748025 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 10

Conread position: 309-649
Cow position: chr27:23292281-23292626 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 309-651
Cow position: chr27:25803690-25803345 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 83

Conread position: 322-616
Cow position: chr27:6160985-6160683 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 103

Conread position: 340-510
Cow position: chr27:27752064-27751890 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 355-651
Cow position: chr27:15275017-15274712 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 121

Conread position: 383-651
Cow position: chr27:26554322-26554053 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 388-651
Cow position: chr27:4980453-4980726 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 61

Conread position: 391-611
Cow position: chr27:8735273-8735492 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 19

Conread position: 407-640
Cow position: chr27:25331987-25331755 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 105

Conread position: 417-645
Cow position: chr27:5912029-5912270 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 7

Conread position: 425-626
Cow position: chr27:19259816-19260022 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 170

Conread position: 451-648
Cow position: chr27:16552015-16552215 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 12

Conread position: 467-646
Cow position: chr27:25084741-25084919 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 102

Conread position: 474-644
Cow position: chr27:15036040-15036214 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 133

Show alignments to all cow chromosomes.