Cow genome map
Conread name: | rret28_l8.y1 |
Conread position: | 13-630 |
Cow position: | chr29:6213226-6213859 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 226 |
Conread position: | 21-577 |
Cow position: | chr29:32286910-32287472 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 30 |
Conread position: | 21-645 |
Cow position: | chr29:5958312-5958945 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 184 |
Conread position: | 21-651 |
Cow position: | chr29:9643053-9642425 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 325 |
Conread position: | 22-317 |
Cow position: | chr29:15948816-15948512 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 179 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 52, 161 |
Conread position: | 22-562 |
Cow position: | chr29:19885777-19886341 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 469 |
Conread position: | 22-596 |
Cow position: | chr29:16111089-16111692 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 22-610 |
Cow position: | chr29:251483-252066 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 395 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 44, 106 |
Conread position: | 22-617 |
Cow position: | chr29:35297563-35298145 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 51 |
Conread position: | 22-632 |
Cow position: | chr29:13582790-13583422 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 169 |
Conread position: | 22-644 |
Cow position: | chr29:42803128-42803766 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 34 |
Conread position: | 22-650 |
Cow position: | chr29:31182114-31182769 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 283 |
Conread position: | 22-651 |
Cow position: | chr29:18856234-18855583 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 32 |
Conread position: | 22-651 |
Cow position: | chr29:27980215-27979562 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 100 |
Conread position: | 22-651 |
Cow position: | chr29:31096671-31096023 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 248 |
Conread position: | 23-651 |
Cow position: | chr29:32559043-32558389 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 345 |
Conread position: | 24-281 |
Cow position: | chr29:2690619-2690887 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 24-282 |
Cow position: | chr29:16023251-16023508 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 194 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 48, 198 |
Conread position: | 24-288 |
Cow position: | chr29:14216681-14216948 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 170 |
Conread position: | 24-336 |
Cow position: | chr29:2840665-2840347 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 24-464 |
Cow position: | chr29:6265562-6265097 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 24-561 |
Cow position: | chr29:14210855-14210300 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 43 |
Conread position: | 24-584 |
Cow position: | chr29:669346-668779 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 344 |
Conread position: | 24-625 |
Cow position: | chr29:43323272-43323888 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 180 |
Conread position: | 24-632 |
Cow position: | chr29:16344952-16345543 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 69 |
Conread position: | 24-641 |
Cow position: | chr29:10647538-10646898 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 175 |
Conread position: | 24-641 |
Cow position: | chr29:20251877-20252512 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 582 |
Conread position: | 24-641 |
Cow position: | chr29:26164114-26163482 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 179 |
Conread position: | 24-645 |
Cow position: | chr29:5982000-5981354 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 44 |
Conread position: | 24-645 |
Cow position: | chr29:32804152-32804764 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 57 |
Conread position: | 24-645 |
Cow position: | chr29:45460434-45461104 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 24-647 |
Cow position: | chr29:7430505-7429850 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 43 |
Conread position: | 24-647 |
Cow position: | chr29:14085417-14084771 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 127 |
Conread position: | 24-647 |
Cow position: | chr29:23976836-23977487 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 174 |
Conread position: | 24-647 |
Cow position: | chr29:34873542-34874162 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 24-651 |
Cow position: | chr29:2100563-2101196 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 43 |
Conread position: | 24-651 |
Cow position: | chr29:2949623-2949001 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 83 |
Conread position: | 24-651 |
Cow position: | chr29:7845094-7845754 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 24-651 |
Cow position: | chr29:10823261-10822619 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 204 |
Conread position: | 24-651 |
Cow position: | chr29:14586635-14587272 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 18 |
Conread position: | 24-651 |
Cow position: | chr29:25931825-25931168 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 18 |
Conread position: | 24-651 |
Cow position: | chr29:32540807-32541459 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 160 |
Conread position: | 24-651 |
Cow position: | chr29:34799092-34798448 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 168 |
Conread position: | 24-651 |
Cow position: | chr29:35815263-35814608 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 588 |
Conread position: | 24-651 |
Cow position: | chr29:38227691-38228336 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 177 |
Conread position: | 24-651 |
Cow position: | chr29:39078993-39078348 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 441 |
Conread position: | 24-651 |
Cow position: | chr29:40502265-40501640 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 174 |
Conread position: | 25-647 |
Cow position: | chr29:21426311-21425660 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 179 |
Conread position: | 25-651 |
Cow position: | chr29:32891511-32892154 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 236 |
Conread position: | 30-536 |
Cow position: | chr29:646518-647031 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 13 |
Conread position: | 31-648 |
Cow position: | chr29:8664243-8664872 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 10 |
Conread position: | 43-651 |
Cow position: | chr29:609892-609286 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 170 |
Conread position: | 44-434 |
Cow position: | chr29:31024054-31023657 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 255 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 62, 23 |
Conread position: | 46-641 |
Cow position: | chr29:19622547-19621925 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 50-645 |
Cow position: | chr29:45586637-45586033 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 539 |
Conread position: | 50-648 |
Cow position: | chr29:9620161-9620758 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 130 |
Conread position: | 61-502 |
Cow position: | chr29:21238626-21238188 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 293 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 16, 134 |
Conread position: | 63-651 |
Cow position: | chr29:47701-47069 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 117 |
Conread position: | 75-592 |
Cow position: | chr29:8774542-8774014 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 339 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 32, 85 |
Conread position: | 86-651 |
Cow position: | chr29:19654409-19654986 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 106 |
Conread position: | 89-627 |
Cow position: | chr29:45205285-45205844 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 231 |
Conread position: | 132-646 |
Cow position: | chr29:38237699-38237163 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 43 |
Conread position: | 150-630 |
Cow position: | chr29:15997822-15997314 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 33 |
Conread position: | 152-539 |
Cow position: | chr29:801547-801155 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 236 |
Conread position: | 165-649 |
Cow position: | chr29:2747573-2747083 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 287 |
Conread position: | 165-651 |
Cow position: | chr29:13650916-13651396 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 8 |
Conread position: | 172-571 |
Cow position: | chr29:27263029-27262620 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 51 |
Conread position: | 182-602 |
Cow position: | chr29:14448780-14449199 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 72 |
Conread position: | 195-617 |
Cow position: | chr29:3176519-3176097 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 49 |
Conread position: | 223-630 |
Cow position: | chr29:2465951-2465517 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 299 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 27, 289 |
Conread position: | 246-491 |
Cow position: | chr29:34754165-34754414 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 171 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 88, 71 |
Conread position: | 247-641 |
Cow position: | chr29:16023511-16023916 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 265 |
Conread position: | 247-651 |
Cow position: | chr29:2691116-2691521 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 173 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 42, 333 |
Conread position: | 247-651 |
Cow position: | chr29:13622904-13622496 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 93 |
Conread position: | 250-550 |
Cow position: | chr29:37609171-37608861 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 200 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 56, 67 |
Conread position: | 256-630 |
Cow position: | chr29:18397175-18397557 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 247 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 59, 201 |
Conread position: | 280-651 |
Cow position: | chr29:42939225-42938838 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 329 |
Conread position: | 340-617 |
Cow position: | chr29:10849795-10850075 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 193 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 37, 249 |
Conread position: | 340-649 |
Cow position: | chr29:34525284-34525602 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 214 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 39, 140 |
Conread position: | 340-651 |
Cow position: | chr29:3328376-3328701 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 258 |
Conread position: | 340-651 |
Cow position: | chr29:14112587-14112895 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 215 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 36, 103 |
Conread position: | 340-651 |
Cow position: | chr29:42092805-42093127 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 203 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 107, 127 |
Conread position: | 341-651 |
Cow position: | chr29:38207632-38207301 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 233 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 35, 264 |
Conread position: | 350-651 |
Cow position: | chr29:2840287-2839984 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 223 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 362-648 |
Cow position: | chr29:3699023-3699313 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 208 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 15, 93 |
Conread position: | 400-641 |
Cow position: | chr29:5236122-5236373 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 121 |
Conread position: | 462-647 |
Cow position: | chr29:36635220-36635027 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 151 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 88, 25 |
Conread position: | 472-593 |
Cow position: | chr29:6009697-6009818 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 472-641 |
Cow position: | chr29:6264822-6264648 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 136 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 125, 78 |
Show alignments to all cow chromosomes.