Cow genome map

Conread name: rret28_l8.y1

Conread position: 20-315
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 20-344
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 222

Conread position: 20-645
Cow position:
Alignm length: 644
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 20-651
Cow position:
Alignm length: 657
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 394

Conread position: 21-152
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 21-568
Cow position:
Alignm length: 568
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 93

Conread position: 21-641
Cow position:
Alignm length: 641
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 103

Conread position: 21-650
Cow position:
Alignm length: 656
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 296

Conread position: 21-651
Cow position:
Alignm length: 652
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 354

Conread position: 21-651
Cow position:
Alignm length: 664
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 21-651
Cow position:
Alignm length: 660
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 22-204
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 9

Conread position: 22-304
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-323
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 192

Conread position: 22-332
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 22-333
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 22-423
Cow position:
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-469
Cow position:
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 22-617
Cow position:
Alignm length: 626
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 397

Conread position: 22-617
Cow position:
Alignm length: 621
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 100

Conread position: 22-627
Cow position:
Alignm length: 628
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 442

Conread position: 22-630
Cow position:
Alignm length: 638
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 22-630
Cow position:
Alignm length: 625
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 324

Conread position: 22-645
Cow position:
Alignm length: 639
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 170

Conread position: 22-648
Cow position:
Alignm length: 654
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 588

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 590

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 22-651
Cow position:
Alignm length: 655
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 487

Conread position: 22-651
Cow position:
Alignm length: 650
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 92

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 590

Conread position: 22-651
Cow position:
Alignm length: 651
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 324

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 258

Conread position: 22-651
Cow position:
Alignm length: 654
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 330

Conread position: 22-651
Cow position:
Alignm length: 666
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 597

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 420

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 184

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 22-651
Cow position:
Alignm length: 664
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 170

Conread position: 23-651
Cow position:
Alignm length: 653
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 619

Conread position: 23-651
Cow position:
Alignm length: 652
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 588

Conread position: 23-651
Cow position:
Alignm length: 651
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 165

Conread position: 24-169
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 24-343
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 112

Conread position: 24-510
Cow position:
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-545
Cow position:
Alignm length: 539
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-583
Cow position:
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 179

Conread position: 24-583
Cow position:
Alignm length: 584
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 472

Conread position: 24-640
Cow position:
Alignm length: 641
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 220

Conread position: 24-641
Cow position:
Alignm length: 637
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-641
Cow position:
Alignm length: 643
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 230

Conread position: 24-641
Cow position:
Alignm length: 642
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 51

Conread position: 24-641
Cow position:
Alignm length: 650
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-641
Cow position:
Alignm length: 649
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 118

Conread position: 24-645
Cow position:
Alignm length: 652
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 43

Conread position: 24-645
Cow position:
Alignm length: 650
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 197

Conread position: 24-647
Cow position:
Alignm length: 652
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 121

Conread position: 24-647
Cow position:
Alignm length: 663
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-647
Cow position:
Alignm length: 643
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 125

Conread position: 24-651
Cow position:
Alignm length: 655
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 283

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 442

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 584

Conread position: 24-651
Cow position:
Alignm length: 646
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 24-651
Cow position:
Alignm length: 659
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 25

Conread position: 24-651
Cow position:
Alignm length: 651
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 172

Conread position: 24-651
Cow position:
Alignm length: 662
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 287

Conread position: 25-630
Cow position:
Alignm length: 636
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 614

Conread position: 25-641
Cow position:
Alignm length: 657
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 594

Conread position: 25-641
Cow position:
Alignm length: 644
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 63

Conread position: 25-641
Cow position:
Alignm length: 645
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 628

Conread position: 26-301
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 26-617
Cow position:
Alignm length: 619
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 26-641
Cow position:
Alignm length: 643
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 30-647
Cow position:
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 31-651
Cow position:
Alignm length: 634
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 33-643
Cow position:
Alignm length: 632
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 103

Conread position: 36-538
Cow position:
Alignm length: 513
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 172

Conread position: 36-583
Cow position:
Alignm length: 556
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 153

Conread position: 38-575
Cow position:
Alignm length: 549
Alignm identity: 355
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 35

Conread position: 43-650
Cow position:
Alignm length: 637
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 392

Conread position: 43-651
Cow position:
Alignm length: 645
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 45-640
Cow position:
Alignm length: 611
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 297

Conread position: 53-651
Cow position:
Alignm length: 623
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 57-617
Cow position:
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 57-651
Cow position:
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 555

Conread position: 60-651
Cow position:
Alignm length: 621
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 143

Conread position: 75-630
Cow position:
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 293

Conread position: 103-598
Cow position:
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 78

Conread position: 119-583
Cow position:
Alignm length: 482
Alignm identity: 313
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 170

Conread position: 127-630
Cow position:
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 127-651
Cow position:
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 90

Conread position: 139-645
Cow position:
Alignm length: 521
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 285

Conread position: 152-647
Cow position:
Alignm length: 512
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 157-647
Cow position:
Alignm length: 508
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 117

Conread position: 159-413
Cow position:
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 163-544
Cow position:
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 40

Conread position: 165-546
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 167

Conread position: 175-522
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 5

Conread position: 176-651
Cow position:
Alignm length: 491
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 98

Conread position: 190-593
Cow position:
Alignm length: 421
Alignm identity: 280
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 38

Conread position: 190-651
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 193-626
Cow position:
Alignm length: 453
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 414

Conread position: 211-651
Cow position:
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 217-651
Cow position:
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 223-647
Cow position:
Alignm length: 441
Alignm identity: 296
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 133

Conread position: 227-643
Cow position:
Alignm length: 432
Alignm identity: 284
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 73

Conread position: 237-651
Cow position:
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 256-583
Cow position:
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 141, 82

Conread position: 257-634
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 72, 33

Conread position: 258-651
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 105, 80

Conread position: 267-583
Cow position:
Alignm length: 326
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 108

Conread position: 270-651
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 163

Conread position: 276-647
Cow position:
Alignm length: 381
Alignm identity: 251
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 76

Conread position: 294-647
Cow position:
Alignm length: 374
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 131

Conread position: 294-651
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 308

Conread position: 317-651
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 13

Conread position: 338-564
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 190

Conread position: 340-583
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 70

Conread position: 340-630
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 271

Conread position: 340-641
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 136

Conread position: 340-651
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 36

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 258

Conread position: 341-647
Cow position:
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 343-651
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 140

Conread position: 344-630
Cow position:
Alignm length: 292
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 103

Conread position: 359-635
Cow position:
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 361-651
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 169

Conread position: 362-651
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 375-648
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 108

Conread position: 379-651
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 102

Conread position: 390-651
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 207

Conread position: 390-651
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 235

Conread position: 396-651
Cow position:
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 69

Conread position: 396-651
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 398-610
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 17

Conread position: 400-651
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 48, 194

Conread position: 407-651
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 7

Conread position: 412-646
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 134, 31

Conread position: 414-647
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 457-651
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 89, 165

Conread position: 461-630
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 471-651
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 75

Conread position: 472-651
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 474-651
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 116

Conread position: 476-651
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 118

Show alignments to all cow chromosomes.