Cow genome map

Conread name: rret28_l8.y1

Conread position: 20-617
Cow position:
Alignm length: 615
Alignm identity: 381
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 129

Conread position: 20-651
Cow position:
Alignm length: 660
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 21-650
Cow position:
Alignm length: 661
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 107

Conread position: 21-651
Cow position:
Alignm length: 649
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 21-651
Cow position:
Alignm length: 647
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 84

Conread position: 22-160
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 22-244
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 129

Conread position: 22-341
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 22-626
Cow position:
Alignm length: 627
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 417

Conread position: 22-643
Cow position:
Alignm length: 656
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 22-650
Cow position:
Alignm length: 652
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 342

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 574

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 22-651
Cow position:
Alignm length: 669
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 600

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 29

Conread position: 22-651
Cow position:
Alignm length: 640
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 324

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 255

Conread position: 24-270
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 24-301
Cow position:
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 123

Conread position: 24-400
Cow position:
Alignm length: 391
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-421
Cow position:
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 24-421
Cow position:
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 174

Conread position: 24-588
Cow position:
Alignm length: 588
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 441

Conread position: 24-597
Cow position:
Alignm length: 598
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 153

Conread position: 24-625
Cow position:
Alignm length: 634
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 587

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 24-641
Cow position:
Alignm length: 647
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 487

Conread position: 24-641
Cow position:
Alignm length: 651
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 140

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 440

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 439

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-645
Cow position:
Alignm length: 651
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-645
Cow position:
Alignm length: 633
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 24-645
Cow position:
Alignm length: 654
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 332

Conread position: 24-647
Cow position:
Alignm length: 651
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 441

Conread position: 24-649
Cow position:
Alignm length: 661
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 172

Conread position: 24-650
Cow position:
Alignm length: 661
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 244

Conread position: 24-651
Cow position:
Alignm length: 655
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 161

Conread position: 24-651
Cow position:
Alignm length: 664
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 119

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 50

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 461

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 640

Conread position: 24-651
Cow position:
Alignm length: 657
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 38

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 582

Conread position: 25-641
Cow position:
Alignm length: 638
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 26-647
Cow position:
Alignm length: 651
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 407

Conread position: 36-645
Cow position:
Alignm length: 625
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 37-651
Cow position:
Alignm length: 647
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 577

Conread position: 43-543
Cow position:
Alignm length: 513
Alignm identity: 324
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 114

Conread position: 64-554
Cow position:
Alignm length: 518
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 382

Conread position: 67-651
Cow position:
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 200

Conread position: 74-651
Cow position:
Alignm length: 596
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 263

Conread position: 76-651
Cow position:
Alignm length: 605
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 69

Conread position: 77-561
Cow position:
Alignm length: 507
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 91

Conread position: 80-648
Cow position:
Alignm length: 590
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 49

Conread position: 85-630
Cow position:
Alignm length: 565
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 127-336
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 127-583
Cow position:
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 306

Conread position: 133-583
Cow position:
Alignm length: 481
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 152-645
Cow position:
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 269

Conread position: 154-651
Cow position:
Alignm length: 525
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 326

Conread position: 163-617
Cow position:
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 7

Conread position: 163-631
Cow position:
Alignm length: 490
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 54

Conread position: 163-651
Cow position:
Alignm length: 513
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 444

Conread position: 180-647
Cow position:
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 215

Conread position: 199-632
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 130, 50

Conread position: 212-651
Cow position:
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 218-645
Cow position:
Alignm length: 448
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 346

Conread position: 241-617
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 21

Conread position: 249-628
Cow position:
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 216

Conread position: 270-651
Cow position:
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 287-641
Cow position:
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 302-629
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 333-643
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 66

Conread position: 340-617
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 154

Conread position: 340-651
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 240

Conread position: 346-647
Cow position:
Alignm length: 314
Alignm identity: 200
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 122

Conread position: 374-650
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 104

Conread position: 377-651
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 33, 86

Conread position: 396-623
Cow position:
Alignm length: 234
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 194

Conread position: 400-647
Cow position:
Alignm length: 252
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 48

Conread position: 400-648
Cow position:
Alignm length: 255
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 30

Conread position: 401-626
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 147

Conread position: 415-616
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 162

Conread position: 443-608
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 161, 89

Conread position: 443-645
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 99, 0

Conread position: 443-645
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 93, 20

Conread position: 443-651
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 161, 82

Conread position: 493-651
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 130, 18

Show alignments to all cow chromosomes.