Cow genome map
Conread name: | rret28_l8.y1 |
Conread position: | 20-617 |
Cow position: | chr4:64984767-64985359 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 381 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 57, 129 |
Conread position: | 20-651 |
Cow position: | chr4:6489933-6489280 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 30 |
Conread position: | 21-650 |
Cow position: | chr4:12240778-12240134 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 107 |
Conread position: | 21-651 |
Cow position: | chr4:4416505-4417142 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 21 |
Conread position: | 21-651 |
Cow position: | chr4:27301037-27300405 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 84 |
Conread position: | 22-160 |
Cow position: | chr4:41958558-41958701 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 22-244 |
Cow position: | chr4:6268230-6268007 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 22-341 |
Cow position: | chr4:18190827-18191152 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 22-626 |
Cow position: | chr4:603447-604070 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 417 |
Conread position: | 22-643 |
Cow position: | chr4:60263730-60263081 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 133 |
Conread position: | 22-650 |
Cow position: | chr4:32212600-32213246 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 342 |
Conread position: | 22-651 |
Cow position: | chr4:159590-160241 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 574 |
Conread position: | 22-651 |
Cow position: | chr4:529832-530486 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 22 |
Conread position: | 22-651 |
Cow position: | chr4:1930196-1929554 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 22-651 |
Cow position: | chr4:3126224-3126891 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 600 |
Conread position: | 22-651 |
Cow position: | chr4:17093433-17092781 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 29 |
Conread position: | 22-651 |
Cow position: | chr4:18337295-18337926 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 324 |
Conread position: | 22-651 |
Cow position: | chr4:18424093-18423435 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 255 |
Conread position: | 24-270 |
Cow position: | chr4:58689658-58689405 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 24-301 |
Cow position: | chr4:29531445-29531167 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 123 |
Conread position: | 24-400 |
Cow position: | chr4:18517333-18517723 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 24-421 |
Cow position: | chr4:31669710-31670114 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 155 |
Conread position: | 24-421 |
Cow position: | chr4:48026837-48027237 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 174 |
Conread position: | 24-588 |
Cow position: | chr4:27334146-27334729 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 441 |
Conread position: | 24-597 |
Cow position: | chr4:31564869-31564276 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 153 |
Conread position: | 24-625 |
Cow position: | chr4:13493753-13494380 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 587 |
Conread position: | 24-641 |
Cow position: | chr4:356344-356979 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 44 |
Conread position: | 24-641 |
Cow position: | chr4:10881982-10882625 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 487 |
Conread position: | 24-641 |
Cow position: | chr4:25599061-25598414 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 140 |
Conread position: | 24-641 |
Cow position: | chr4:33072386-33071750 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 440 |
Conread position: | 24-641 |
Cow position: | chr4:43881540-43882181 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 439 |
Conread position: | 24-641 |
Cow position: | chr4:44726031-44726661 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 179 |
Conread position: | 24-645 |
Cow position: | chr4:16360346-16360996 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 24-645 |
Cow position: | chr4:41333147-41333761 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 135 |
Conread position: | 24-645 |
Cow position: | chr4:50975052-50975699 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 332 |
Conread position: | 24-647 |
Cow position: | chr4:1049826-1049181 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 441 |
Conread position: | 24-649 |
Cow position: | chr4:46664956-46665613 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 172 |
Conread position: | 24-650 |
Cow position: | chr4:28831993-28832633 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 244 |
Conread position: | 24-651 |
Cow position: | chr4:5880600-5881245 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 161 |
Conread position: | 24-651 |
Cow position: | chr4:6206031-6206685 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 119 |
Conread position: | 24-651 |
Cow position: | chr4:17925524-17924884 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 50 |
Conread position: | 24-651 |
Cow position: | chr4:22473788-22474431 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 43 |
Conread position: | 24-651 |
Cow position: | chr4:36896807-36897457 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 461 |
Conread position: | 24-651 |
Cow position: | chr4:43319209-43318558 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 640 |
Conread position: | 24-651 |
Cow position: | chr4:57984422-57985069 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 38 |
Conread position: | 24-651 |
Cow position: | chr4:67681626-67682274 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 582 |
Conread position: | 25-641 |
Cow position: | chr4:12587773-12588403 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 17 |
Conread position: | 26-647 |
Cow position: | chr4:16639047-16639694 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 407 |
Conread position: | 36-645 |
Cow position: | chr4:44925076-44924458 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 149 |
Conread position: | 37-651 |
Cow position: | chr4:5444389-5443744 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 577 |
Conread position: | 43-543 |
Cow position: | chr4:4438795-4439298 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 324 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 29, 114 |
Conread position: | 64-554 |
Cow position: | chr4:14775916-14776430 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 382 |
Conread position: | 67-651 |
Cow position: | chr4:44780748-44780143 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 200 |
Conread position: | 74-651 |
Cow position: | chr4:11110780-11110196 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 263 |
Conread position: | 76-651 |
Cow position: | chr4:5926353-5925760 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 69 |
Conread position: | 77-561 |
Cow position: | chr4:16057167-16057671 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 91 |
Conread position: | 80-648 |
Cow position: | chr4:61713109-61712539 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 49 |
Conread position: | 85-630 |
Cow position: | chr4:10093406-10093962 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 28 |
Conread position: | 127-336 |
Cow position: | chr4:100262-100052 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 127-583 |
Cow position: | chr4:49716218-49716685 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 306 |
Conread position: | 133-583 |
Cow position: | chr4:14820324-14819858 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 43 |
Conread position: | 152-645 |
Cow position: | chr4:51042724-51042214 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 269 |
Conread position: | 154-651 |
Cow position: | chr4:41955322-41955844 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 326 |
Conread position: | 163-617 |
Cow position: | chr4:27294740-27294258 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 7 |
Conread position: | 163-631 |
Cow position: | chr4:30471810-30472293 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 54 |
Conread position: | 163-651 |
Cow position: | chr4:45106036-45106547 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 444 |
Conread position: | 180-647 |
Cow position: | chr4:4177866-4178327 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 215 |
Conread position: | 199-632 |
Cow position: | chr4:54239598-54240027 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 299 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 130, 50 |
Conread position: | 212-651 |
Cow position: | chr4:69521190-69521617 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 66 |
Conread position: | 218-645 |
Cow position: | chr4:967447-967001 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 346 |
Conread position: | 241-617 |
Cow position: | chr4:493949-493555 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 268 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 15, 21 |
Conread position: | 249-628 |
Cow position: | chr4:9847560-9847155 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 216 |
Conread position: | 270-651 |
Cow position: | chr4:34178553-34178150 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 287-641 |
Cow position: | chr4:26877079-26876702 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 302-629 |
Cow position: | chr4:68110313-68109968 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 333-643 |
Cow position: | chr4:14755900-14755587 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 230 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 20, 66 |
Conread position: | 340-617 |
Cow position: | chr4:20181802-20182076 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 192 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 37, 154 |
Conread position: | 340-651 |
Cow position: | chr4:99454-99141 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 230 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 36, 240 |
Conread position: | 346-647 |
Cow position: | chr4:47462586-47462897 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 200 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 56, 122 |
Conread position: | 374-650 |
Cow position: | chr4:42405402-42405689 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 200 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 28, 104 |
Conread position: | 377-651 |
Cow position: | chr4:41959697-41959981 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 33, 86 |
Conread position: | 396-623 |
Cow position: | chr4:48027830-48028062 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 135 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 61, 194 |
Conread position: | 400-647 |
Cow position: | chr4:34183799-34183561 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 192 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 8, 48 |
Conread position: | 400-648 |
Cow position: | chr4:48027643-48027896 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 160 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 43, 30 |
Conread position: | 401-626 |
Cow position: | chr4:6567212-6567434 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 46, 147 |
Conread position: | 415-616 |
Cow position: | chr4:47253497-47253293 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 41, 162 |
Conread position: | 443-608 |
Cow position: | chr4:30795529-30795364 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 161, 89 |
Conread position: | 443-645 |
Cow position: | chr4:41191734-41191527 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 161 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 443-645 |
Cow position: | chr4:41428179-41428384 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 159 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 93, 20 |
Conread position: | 443-651 |
Cow position: | chr4:57957865-57958065 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 161, 82 |
Conread position: | 493-651 |
Cow position: | chr4:13958096-13958258 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 130, 18 |
Show alignments to all cow chromosomes.