Cow genome map
| Conread name: | rret28_l8.y1 |
| Conread position: | 13-648 |
| Cow position: | chr5:53006159-53006790 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 20-651 |
| Cow position: | chr5:32363506-32364117 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 21-566 |
| Cow position: | chr5:6588496-6587927 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 21-617 |
| Cow position: | chr5:34902718-34903319 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 30 |
| Conread position: | 21-630 |
| Cow position: | chr5:52613420-52612799 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 21-651 |
| Cow position: | chr5:10775742-10775079 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 187 |
| Conread position: | 21-651 |
| Cow position: | chr5:26078670-26078008 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 21-651 |
| Cow position: | chr5:47894012-47893360 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 22-626 |
| Cow position: | chr5:18121949-18121329 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 22-630 |
| Cow position: | chr5:4385771-4386395 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 22-651 |
| Cow position: | chr5:3964976-3965628 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 181 |
| Conread position: | 22-651 |
| Cow position: | chr5:10842851-10842197 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 438 |
| Conread position: | 22-651 |
| Cow position: | chr5:18664319-18664959 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 327 |
| Conread position: | 22-651 |
| Cow position: | chr5:23959788-23959145 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 254 |
| Conread position: | 22-651 |
| Cow position: | chr5:27908745-27908087 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 22-651 |
| Cow position: | chr5:31707078-31707747 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 22-651 |
| Cow position: | chr5:32773302-32773949 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 321 |
| Conread position: | 22-651 |
| Cow position: | chr5:35300626-35301283 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 200 |
| Conread position: | 22-651 |
| Cow position: | chr5:42505531-42506189 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 597 |
| Conread position: | 22-651 |
| Cow position: | chr5:45700842-45701498 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 195 |
| Conread position: | 22-651 |
| Cow position: | chr5:46005325-46004677 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 202 |
| Conread position: | 22-651 |
| Cow position: | chr5:46807839-46808497 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 591 |
| Conread position: | 22-651 |
| Cow position: | chr5:47830544-47829893 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 22-651 |
| Cow position: | chr5:48808211-48807552 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 22-651 |
| Cow position: | chr5:58196551-58197194 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 23-601 |
| Cow position: | chr5:28012183-28012800 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 23-651 |
| Cow position: | chr5:4018672-4018014 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 596 |
| Conread position: | 23-651 |
| Cow position: | chr5:4757635-4756999 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 379 |
| Conread position: | 24-172 |
| Cow position: | chr5:415187-415035 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-298 |
| Cow position: | chr5:29766418-29766693 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 246 |
| Conread position: | 24-314 |
| Cow position: | chr5:35526336-35526622 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 24-343 |
| Cow position: | chr5:32308862-32308540 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 24-382 |
| Cow position: | chr5:59639311-59639677 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 24-445 |
| Cow position: | chr5:44460012-44460450 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 24-487 |
| Cow position: | chr5:28241583-28242059 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 24-490 |
| Cow position: | chr5:45181615-45181131 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 24-528 |
| Cow position: | chr5:38073561-38074083 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 24-540 |
| Cow position: | chr5:46738044-46737513 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 248 |
| Conread position: | 24-573 |
| Cow position: | chr5:41956826-41956273 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 24-583 |
| Cow position: | chr5:49758131-49757567 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 24-596 |
| Cow position: | chr5:10919355-10919944 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 359 |
| Conread position: | 24-616 |
| Cow position: | chr5:53625361-53624778 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 24-628 |
| Cow position: | chr5:57482009-57481384 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 578 |
| Conread position: | 24-630 |
| Cow position: | chr5:55628521-55629152 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-641 |
| Cow position: | chr5:1341502-1340856 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 257 |
| Conread position: | 24-641 |
| Cow position: | chr5:3786452-3787099 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 24-641 |
| Cow position: | chr5:4069750-4070395 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 187 |
| Conread position: | 24-641 |
| Cow position: | chr5:24099202-24099835 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 24-641 |
| Cow position: | chr5:37732881-37733523 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 249 |
| Conread position: | 24-641 |
| Cow position: | chr5:49519093-49519730 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 24-641 |
| Cow position: | chr5:54792107-54791458 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 24-641 |
| Cow position: | chr5:73489028-73488386 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 293 |
| Conread position: | 24-645 |
| Cow position: | chr5:2914979-2915620 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 179 |
| Conread position: | 24-645 |
| Cow position: | chr5:18401171-18400516 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 180 |
| Conread position: | 24-647 |
| Cow position: | chr5:34697133-34697776 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 441 |
| Conread position: | 24-647 |
| Cow position: | chr5:46629659-46629010 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 24-651 |
| Cow position: | chr5:3503586-3502924 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 172 |
| Conread position: | 24-651 |
| Cow position: | chr5:6154370-6153719 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 24-651 |
| Cow position: | chr5:14784832-14784186 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 24-651 |
| Cow position: | chr5:30579859-30580524 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 496 |
| Conread position: | 24-651 |
| Cow position: | chr5:41528245-41527609 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 284 |
| Conread position: | 24-651 |
| Cow position: | chr5:41961194-41960559 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 24-651 |
| Cow position: | chr5:64781485-64780831 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 33-647 |
| Cow position: | chr5:12643188-12642571 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 43-336 |
| Cow position: | chr5:49591549-49591252 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 46-648 |
| Cow position: | chr5:28950314-28949700 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 279 |
| Conread position: | 57-335 |
| Cow position: | chr5:46776632-46776916 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 60-651 |
| Cow position: | chr5:41554764-41554151 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 74-425 |
| Cow position: | chr5:27056101-27055729 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 82-651 |
| Cow position: | chr5:18273338-18273946 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 35 |
| Conread position: | 91-647 |
| Cow position: | chr5:23669516-23668953 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 19 |
| Conread position: | 98-650 |
| Cow position: | chr5:46664625-46665192 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 408 |
| Conread position: | 104-441 |
| Cow position: | chr5:52434169-52434508 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 233, 34 |
| Conread position: | 104-647 |
| Cow position: | chr5:46668572-46669116 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 106-647 |
| Cow position: | chr5:59282936-59283496 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 133 |
| Conread position: | 122-556 |
| Cow position: | chr5:13046084-13046536 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 122-651 |
| Cow position: | chr5:40788693-40789239 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 433 |
| Conread position: | 132-626 |
| Cow position: | chr5:307685-307173 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 476 |
| Conread position: | 152-533 |
| Cow position: | chr5:9419406-9419018 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 152-628 |
| Cow position: | chr5:41465736-41466231 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 312 |
| Conread position: | 175-546 |
| Cow position: | chr5:34297627-34298011 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 175-645 |
| Cow position: | chr5:31100738-31100255 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 139 |
| Conread position: | 175-651 |
| Cow position: | chr5:18885843-18885352 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 248 |
| Conread position: | 179-645 |
| Cow position: | chr5:6533914-6534383 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 185-651 |
| Cow position: | chr5:10856120-10855637 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 250 |
| Conread position: | 188-651 |
| Cow position: | chr5:14344720-14344254 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 190-651 |
| Cow position: | chr5:5103906-5104406 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 239-546 |
| Cow position: | chr5:24999236-24998920 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 132 |
| Conread position: | 240-552 |
| Cow position: | chr5:39016787-39017112 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 247-651 |
| Cow position: | chr5:51309096-51308672 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 206 |
| Conread position: | 257-536 |
| Cow position: | chr5:27654584-27654871 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 136 |
| Conread position: | 260-651 |
| Cow position: | chr5:12731939-12731530 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 342 |
| Conread position: | 261-647 |
| Cow position: | chr5:24107908-24107509 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 263-641 |
| Cow position: | chr5:7274625-7275014 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 267-625 |
| Cow position: | chr5:20311582-20311200 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 206 |
| Conread position: | 270-649 |
| Cow position: | chr5:23687109-23686708 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 296-651 |
| Cow position: | chr5:50870450-50870800 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 322-651 |
| Cow position: | chr5:46777232-46777578 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 340-645 |
| Cow position: | chr5:988202-987899 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 203 |
| Conread position: | 340-651 |
| Cow position: | chr5:59061496-59061822 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 341-469 |
| Cow position: | chr5:32282104-32281973 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 341-645 |
| Cow position: | chr5:48137480-48137177 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 341-651 |
| Cow position: | chr5:27197181-27197494 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 342-645 |
| Cow position: | chr5:24151643-24151949 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 125 |
| Conread position: | 357-651 |
| Cow position: | chr5:18560526-18560226 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 358-651 |
| Cow position: | chr5:29767007-29767307 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 362-617 |
| Cow position: | chr5:15375598-15375853 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 363-630 |
| Cow position: | chr5:32308224-32307951 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 218 |
| Conread position: | 374-643 |
| Cow position: | chr5:26183737-26184015 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 375-651 |
| Cow position: | chr5:47077900-47078176 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 376-591 |
| Cow position: | chr5:31700474-31700259 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 175 |
| Conread position: | 388-651 |
| Cow position: | chr5:40350020-40349748 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 389-650 |
| Cow position: | chr5:7143137-7142875 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 120 |
| Conread position: | 390-651 |
| Cow position: | chr5:23229905-23230173 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 397-645 |
| Cow position: | chr5:29670074-29670329 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 402-650 |
| Cow position: | chr5:41376976-41376722 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 140, 45 |
| Conread position: | 403-618 |
| Cow position: | chr5:29434787-29434571 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 18 |
| Conread position: | 403-645 |
| Cow position: | chr5:40923713-40923472 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 415-624 |
| Cow position: | chr5:54860984-54860768 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 416-651 |
| Cow position: | chr5:7811314-7811071 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 424-609 |
| Cow position: | chr5:44487-44296 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 443-651 |
| Cow position: | chr5:10813784-10813566 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 99, 151 |
| Conread position: | 449-649 |
| Cow position: | chr5:27003208-27003411 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 457-630 |
| Cow position: | chr5:32951882-32952056 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 458-648 |
| Cow position: | chr5:32281784-32281588 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 487-651 |
| Cow position: | chr5:61081203-61081030 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 26 |
Show alignments to all cow chromosomes.