Cow genome map

Conread name: rret28_l8.y1

Conread position: 13-648
Cow position:
Alignm length: 651
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 94

Conread position: 20-651
Cow position:
Alignm length: 635
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 64

Conread position: 21-566
Cow position:
Alignm length: 581
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 21-617
Cow position:
Alignm length: 625
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 30

Conread position: 21-630
Cow position:
Alignm length: 635
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 77

Conread position: 21-651
Cow position:
Alignm length: 667
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 187

Conread position: 21-651
Cow position:
Alignm length: 669
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 46

Conread position: 21-651
Cow position:
Alignm length: 657
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 22-626
Cow position:
Alignm length: 632
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 22-630
Cow position:
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 181

Conread position: 22-651
Cow position:
Alignm length: 661
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 438

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 327

Conread position: 22-651
Cow position:
Alignm length: 648
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 254

Conread position: 22-651
Cow position:
Alignm length: 664
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 22-651
Cow position:
Alignm length: 670
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 22-651
Cow position:
Alignm length: 652
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 321

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 200

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 597

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 195

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 202

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 591

Conread position: 22-651
Cow position:
Alignm length: 654
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 22-651
Cow position:
Alignm length: 660
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 66

Conread position: 23-601
Cow position:
Alignm length: 619
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 84

Conread position: 23-651
Cow position:
Alignm length: 660
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 596

Conread position: 23-651
Cow position:
Alignm length: 650
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 379

Conread position: 24-172
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 24-298
Cow position:
Alignm length: 277
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 246

Conread position: 24-314
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 41

Conread position: 24-343
Cow position:
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 109

Conread position: 24-382
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 129

Conread position: 24-445
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-487
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 102

Conread position: 24-490
Cow position:
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-528
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 24-540
Cow position:
Alignm length: 534
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 248

Conread position: 24-573
Cow position:
Alignm length: 569
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 105

Conread position: 24-583
Cow position:
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 24-596
Cow position:
Alignm length: 594
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 359

Conread position: 24-616
Cow position:
Alignm length: 613
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 62

Conread position: 24-628
Cow position:
Alignm length: 627
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 578

Conread position: 24-630
Cow position:
Alignm length: 632
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-641
Cow position:
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 257

Conread position: 24-641
Cow position:
Alignm length: 650
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 90

Conread position: 24-641
Cow position:
Alignm length: 653
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 35

Conread position: 24-641
Cow position:
Alignm length: 649
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 249

Conread position: 24-641
Cow position:
Alignm length: 643
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 66

Conread position: 24-641
Cow position:
Alignm length: 656
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 161

Conread position: 24-641
Cow position:
Alignm length: 645
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 293

Conread position: 24-645
Cow position:
Alignm length: 649
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 179

Conread position: 24-645
Cow position:
Alignm length: 664
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 180

Conread position: 24-647
Cow position:
Alignm length: 648
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 441

Conread position: 24-647
Cow position:
Alignm length: 654
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 24-651
Cow position:
Alignm length: 667
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 172

Conread position: 24-651
Cow position:
Alignm length: 654
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 213

Conread position: 24-651
Cow position:
Alignm length: 665
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 101

Conread position: 24-651
Cow position:
Alignm length: 667
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 496

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 284

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 133

Conread position: 24-651
Cow position:
Alignm length: 657
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 33-647
Cow position:
Alignm length: 632
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 122

Conread position: 43-336
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 46-648
Cow position:
Alignm length: 623
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 279

Conread position: 57-335
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 60-651
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 74-425
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 82-651
Cow position:
Alignm length: 617
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 35

Conread position: 91-647
Cow position:
Alignm length: 576
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 19

Conread position: 98-650
Cow position:
Alignm length: 573
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 408

Conread position: 104-441
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 233, 34

Conread position: 104-647
Cow position:
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 46

Conread position: 106-647
Cow position:
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 133

Conread position: 122-556
Cow position:
Alignm length: 459
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 122-651
Cow position:
Alignm length: 554
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 433

Conread position: 132-626
Cow position:
Alignm length: 515
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 476

Conread position: 152-533
Cow position:
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 152-628
Cow position:
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 312

Conread position: 175-546
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 76, 0

Conread position: 175-645
Cow position:
Alignm length: 494
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 139

Conread position: 175-651
Cow position:
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 248

Conread position: 179-645
Cow position:
Alignm length: 483
Alignm identity: 305
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 20

Conread position: 185-651
Cow position:
Alignm length: 487
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 250

Conread position: 188-651
Cow position:
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 103

Conread position: 190-651
Cow position:
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 239-546
Cow position:
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 132

Conread position: 240-552
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 247-651
Cow position:
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 206

Conread position: 257-536
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 136

Conread position: 260-651
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 342

Conread position: 261-647
Cow position:
Alignm length: 401
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 127

Conread position: 263-641
Cow position:
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 119

Conread position: 267-625
Cow position:
Alignm length: 388
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 206

Conread position: 270-649
Cow position:
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 296-651
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 5, 36

Conread position: 322-651
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 48

Conread position: 340-645
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 203

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 341-469
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 129

Conread position: 341-645
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 41

Conread position: 341-651
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 342-645
Cow position:
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 125

Conread position: 357-651
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 93

Conread position: 358-651
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 362-617
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 88

Conread position: 363-630
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 218

Conread position: 374-643
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 43

Conread position: 375-651
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 26

Conread position: 376-591
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 175

Conread position: 388-651
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 114

Conread position: 389-650
Cow position:
Alignm length: 268
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 120

Conread position: 390-651
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 74

Conread position: 397-645
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 118

Conread position: 402-650
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 140, 45

Conread position: 403-618
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 144, 18

Conread position: 403-645
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 18

Conread position: 415-624
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 32

Conread position: 416-651
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 31

Conread position: 424-609
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 23, 171

Conread position: 443-651
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 99, 151

Conread position: 449-649
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 63

Conread position: 457-630
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 133

Conread position: 458-648
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 123

Conread position: 487-651
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 26

Show alignments to all cow chromosomes.