Cow genome map

Conread name: rret28_l8.y1

Conread position: 5-623
Cow position:
Alignm length: 634
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 196

Conread position: 13-633
Cow position:
Alignm length: 657
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 175

Conread position: 18-641
Cow position:
Alignm length: 650
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 45

Conread position: 18-649
Cow position:
Alignm length: 669
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 20-580
Cow position:
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 21-325
Cow position:
Alignm length: 310
Alignm identity: 203
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 66

Conread position: 21-511
Cow position:
Alignm length: 509
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 336

Conread position: 21-630
Cow position:
Alignm length: 636
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 155

Conread position: 21-641
Cow position:
Alignm length: 645
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 562

Conread position: 21-642
Cow position:
Alignm length: 640
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 78

Conread position: 21-651
Cow position:
Alignm length: 669
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 91

Conread position: 21-651
Cow position:
Alignm length: 669
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 599

Conread position: 21-651
Cow position:
Alignm length: 655
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 487

Conread position: 22-334
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 85, 57

Conread position: 22-336
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 227

Conread position: 22-394
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 139

Conread position: 22-500
Cow position:
Alignm length: 494
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 208

Conread position: 22-546
Cow position:
Alignm length: 553
Alignm identity: 366
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 27

Conread position: 22-598
Cow position:
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 576

Conread position: 22-616
Cow position:
Alignm length: 621
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 418

Conread position: 22-626
Cow position:
Alignm length: 640
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 461

Conread position: 22-641
Cow position:
Alignm length: 650
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 574

Conread position: 22-647
Cow position:
Alignm length: 655
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 179

Conread position: 22-647
Cow position:
Alignm length: 650
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 135

Conread position: 22-650
Cow position:
Alignm length: 650
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 180

Conread position: 22-650
Cow position:
Alignm length: 652
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 41

Conread position: 22-651
Cow position:
Alignm length: 647
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 244

Conread position: 22-651
Cow position:
Alignm length: 650
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 403

Conread position: 23-651
Cow position:
Alignm length: 663
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 242

Conread position: 24-266
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 155

Conread position: 24-351
Cow position:
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-378
Cow position:
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 24-383
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 174

Conread position: 24-419
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 24-464
Cow position:
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 51

Conread position: 24-476
Cow position:
Alignm length: 471
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 155

Conread position: 24-534
Cow position:
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 24-617
Cow position:
Alignm length: 616
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 24-624
Cow position:
Alignm length: 632
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 113

Conread position: 24-628
Cow position:
Alignm length: 641
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-629
Cow position:
Alignm length: 629
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 110

Conread position: 24-630
Cow position:
Alignm length: 630
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 365

Conread position: 24-645
Cow position:
Alignm length: 647
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 158

Conread position: 24-647
Cow position:
Alignm length: 658
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 189

Conread position: 24-647
Cow position:
Alignm length: 637
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-647
Cow position:
Alignm length: 659
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 139

Conread position: 24-647
Cow position:
Alignm length: 664
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 163

Conread position: 24-650
Cow position:
Alignm length: 649
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 148

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 24-651
Cow position:
Alignm length: 663
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 279

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 660
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 24-651
Cow position:
Alignm length: 660
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 120

Conread position: 24-651
Cow position:
Alignm length: 652
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 24-651
Cow position:
Alignm length: 643
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 24-651
Cow position:
Alignm length: 659
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 24-651
Cow position:
Alignm length: 651
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 25-630
Cow position:
Alignm length: 623
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 433

Conread position: 26-647
Cow position:
Alignm length: 647
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 91

Conread position: 28-648
Cow position:
Alignm length: 657
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 30-651
Cow position:
Alignm length: 646
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 586

Conread position: 31-645
Cow position:
Alignm length: 643
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 32-546
Cow position:
Alignm length: 535
Alignm identity: 345
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 98

Conread position: 43-645
Cow position:
Alignm length: 618
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 43-647
Cow position:
Alignm length: 636
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 50-617
Cow position:
Alignm length: 586
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 16

Conread position: 50-630
Cow position:
Alignm length: 607
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 51-651
Cow position:
Alignm length: 642
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 59-598
Cow position:
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 230

Conread position: 67-630
Cow position:
Alignm length: 592
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 368

Conread position: 68-651
Cow position:
Alignm length: 609
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 60

Conread position: 81-650
Cow position:
Alignm length: 601
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 83-487
Cow position:
Alignm length: 414
Alignm identity: 256
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 168, 35

Conread position: 89-634
Cow position:
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 264

Conread position: 106-485
Cow position:
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 84

Conread position: 106-645
Cow position:
Alignm length: 558
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 106-651
Cow position:
Alignm length: 568
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 393

Conread position: 106-651
Cow position:
Alignm length: 570
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 370

Conread position: 137-630
Cow position:
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 346

Conread position: 162-616
Cow position:
Alignm length: 478
Alignm identity: 321
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 32

Conread position: 163-351
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 115

Conread position: 163-645
Cow position:
Alignm length: 504
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 27

Conread position: 164-651
Cow position:
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 448

Conread position: 180-631
Cow position:
Alignm length: 468
Alignm identity: 292
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 161

Conread position: 181-509
Cow position:
Alignm length: 342
Alignm identity: 229
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 70, 190

Conread position: 185-650
Cow position:
Alignm length: 490
Alignm identity: 322
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 28, 285

Conread position: 209-645
Cow position:
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 37

Conread position: 212-651
Cow position:
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 267

Conread position: 218-630
Cow position:
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 395

Conread position: 227-618
Cow position:
Alignm length: 401
Alignm identity: 266
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 75

Conread position: 244-630
Cow position:
Alignm length: 406
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 7

Conread position: 251-651
Cow position:
Alignm length: 418
Alignm identity: 274
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 181

Conread position: 260-651
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 144

Conread position: 261-645
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 180

Conread position: 287-546
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 93

Conread position: 326-651
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 124

Conread position: 327-643
Cow position:
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 339-641
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 97

Conread position: 340-549
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 340-647
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 11

Conread position: 340-651
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 130

Conread position: 343-545
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 363-641
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 60

Conread position: 369-602
Cow position:
Alignm length: 249
Alignm identity: 192
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 25

Conread position: 377-651
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 220

Conread position: 381-647
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 169

Conread position: 400-651
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 195

Conread position: 410-617
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 13

Conread position: 416-645
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 188, 30

Conread position: 420-641
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 186

Conread position: 425-651
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 115, 36

Conread position: 427-651
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 124

Conread position: 436-651
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 445-651
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 21

Conread position: 451-651
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 143

Conread position: 454-651
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 7

Conread position: 456-651
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 138

Conread position: 472-641
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 30

Conread position: 472-651
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 128

Conread position: 477-647
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 40

Conread position: 477-648
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 477-651
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 150, 103

Conread position: 484-651
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.