Cow genome map

Conread name: rret28_l8.y1

Conread position: 13-537
Cow position:
Alignm length: 544
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 168

Conread position: 17-651
Cow position:
Alignm length: 651
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 20-350
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 179

Conread position: 20-617
Cow position:
Alignm length: 640
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 301

Conread position: 21-464
Cow position:
Alignm length: 461
Alignm identity: 304
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 58, 47

Conread position: 21-641
Cow position:
Alignm length: 643
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 180

Conread position: 21-641
Cow position:
Alignm length: 659
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 118

Conread position: 21-651
Cow position:
Alignm length: 653
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 199

Conread position: 21-651
Cow position:
Alignm length: 653
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 46

Conread position: 21-651
Cow position:
Alignm length: 665
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 286

Conread position: 22-572
Cow position:
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 513

Conread position: 22-617
Cow position:
Alignm length: 621
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 445

Conread position: 22-626
Cow position:
Alignm length: 624
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 116

Conread position: 22-645
Cow position:
Alignm length: 657
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 499

Conread position: 22-647
Cow position:
Alignm length: 656
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 133

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 298

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 100

Conread position: 22-651
Cow position:
Alignm length: 658
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 29

Conread position: 22-651
Cow position:
Alignm length: 659
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 596

Conread position: 22-651
Cow position:
Alignm length: 653
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 53

Conread position: 22-651
Cow position:
Alignm length: 649
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 263

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 416

Conread position: 22-651
Cow position:
Alignm length: 656
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 390

Conread position: 22-651
Cow position:
Alignm length: 657
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 366

Conread position: 22-651
Cow position:
Alignm length: 654
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 590

Conread position: 22-651
Cow position:
Alignm length: 676
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 396

Conread position: 22-651
Cow position:
Alignm length: 662
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 55

Conread position: 24-315
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 24-366
Cow position:
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 24-459
Cow position:
Alignm length: 461
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 51

Conread position: 24-462
Cow position:
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 24-464
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 141

Conread position: 24-579
Cow position:
Alignm length: 575
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 61

Conread position: 24-599
Cow position:
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 42

Conread position: 24-599
Cow position:
Alignm length: 601
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 584

Conread position: 24-616
Cow position:
Alignm length: 634
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 24-624
Cow position:
Alignm length: 612
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 306

Conread position: 24-625
Cow position:
Alignm length: 624
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 24-630
Cow position:
Alignm length: 631
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 468

Conread position: 24-630
Cow position:
Alignm length: 628
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 213

Conread position: 24-630
Cow position:
Alignm length: 631
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 179

Conread position: 24-630
Cow position:
Alignm length: 621
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 217

Conread position: 24-630
Cow position:
Alignm length: 630
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 408

Conread position: 24-634
Cow position:
Alignm length: 635
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 177

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 24-641
Cow position:
Alignm length: 644
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 461

Conread position: 24-641
Cow position:
Alignm length: 637
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 274

Conread position: 24-641
Cow position:
Alignm length: 650
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 174

Conread position: 24-641
Cow position:
Alignm length: 641
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 616

Conread position: 24-641
Cow position:
Alignm length: 627
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 321

Conread position: 24-641
Cow position:
Alignm length: 661
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 458

Conread position: 24-643
Cow position:
Alignm length: 638
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 155

Conread position: 24-645
Cow position:
Alignm length: 649
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 115

Conread position: 24-647
Cow position:
Alignm length: 649
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 590

Conread position: 24-650
Cow position:
Alignm length: 662
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 654
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-651
Cow position:
Alignm length: 653
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 219

Conread position: 24-651
Cow position:
Alignm length: 667
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 38

Conread position: 24-651
Cow position:
Alignm length: 645
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 55

Conread position: 24-651
Cow position:
Alignm length: 650
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 207

Conread position: 24-651
Cow position:
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 262

Conread position: 24-651
Cow position:
Alignm length: 646
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 25-349
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 64

Conread position: 25-625
Cow position:
Alignm length: 638
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 587

Conread position: 25-630
Cow position:
Alignm length: 634
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 155

Conread position: 31-651
Cow position:
Alignm length: 655
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 354

Conread position: 43-647
Cow position:
Alignm length: 613
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 107

Conread position: 57-650
Cow position:
Alignm length: 613
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 415

Conread position: 59-651
Cow position:
Alignm length: 626
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 339

Conread position: 65-651
Cow position:
Alignm length: 605
Alignm identity: 377
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 11

Conread position: 67-645
Cow position:
Alignm length: 608
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 417

Conread position: 74-651
Cow position:
Alignm length: 600
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 105

Conread position: 76-651
Cow position:
Alignm length: 612
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 77-651
Cow position:
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 45

Conread position: 91-626
Cow position:
Alignm length: 545
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 250

Conread position: 106-651
Cow position:
Alignm length: 564
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 483

Conread position: 120-651
Cow position:
Alignm length: 550
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 127-479
Cow position:
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 284

Conread position: 134-634
Cow position:
Alignm length: 520
Alignm identity: 332
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 164, 22

Conread position: 136-647
Cow position:
Alignm length: 538
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 42

Conread position: 137-640
Cow position:
Alignm length: 527
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 470

Conread position: 142-651
Cow position:
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 445

Conread position: 145-509
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 162-546
Cow position:
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 163-628
Cow position:
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 66

Conread position: 163-651
Cow position:
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 102

Conread position: 175-535
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 102

Conread position: 178-552
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 18

Conread position: 179-615
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 12

Conread position: 190-645
Cow position:
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 416

Conread position: 190-651
Cow position:
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 348

Conread position: 190-651
Cow position:
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 190-651
Cow position:
Alignm length: 484
Alignm identity: 331
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 6

Conread position: 200-459
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 137, 181

Conread position: 200-646
Cow position:
Alignm length: 465
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 251

Conread position: 211-617
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 142

Conread position: 239-651
Cow position:
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 241-645
Cow position:
Alignm length: 414
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 13

Conread position: 280-497
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 282-632
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 191

Conread position: 304-651
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 10

Conread position: 311-617
Cow position:
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 119

Conread position: 322-617
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 18

Conread position: 322-641
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 102

Conread position: 323-583
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 13

Conread position: 333-651
Cow position:
Alignm length: 339
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 7

Conread position: 333-651
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 91

Conread position: 338-647
Cow position:
Alignm length: 319
Alignm identity: 226
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 101

Conread position: 340-574
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 78

Conread position: 340-599
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 34

Conread position: 340-643
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 154

Conread position: 340-647
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 340-651
Cow position:
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 71

Conread position: 341-617
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 7

Conread position: 341-645
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 41

Conread position: 345-651
Cow position:
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 350-544
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 0

Conread position: 362-647
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 122

Conread position: 377-604
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 15

Conread position: 393-645
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 119

Conread position: 401-630
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 188

Conread position: 403-575
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 411-617
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 167

Conread position: 411-644
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 123

Conread position: 417-651
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 180

Conread position: 419-630
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 49

Conread position: 426-630
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 37

Conread position: 432-651
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 130

Conread position: 436-645
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 112, 36

Conread position: 443-630
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 154

Conread position: 452-647
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 136

Conread position: 472-651
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 21

Conread position: 474-651
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 493-651
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 102

Show alignments to all cow chromosomes.