Cow genome map


           Conread name:
           rret34_p14.y1
        

               Conread position:
               21-265
               

               Cow position:
               chr11:50871017-50871260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               151, 84
               

               Conread position:
               260-499
               

               Cow position:
               chr11:35277977-35277744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               261-506
               

               Cow position:
               chr11:72854393-72854143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               263-479
               

               Cow position:
               chr11:52155657-52155873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               263-506
               

               Cow position:
               chr11:30369143-30368902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               273-449
               

               Cow position:
               chr11:15510535-15510714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               273-468
               

               Cow position:
               chr11:29575626-29575826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 130
               
Show alignments to all cow chromosomes.