Cow genome map


           Conread name:
           rret34_p14.y1
        

               Conread position:
               263-428
               

               Cow position:
               chr5:54392911-54393076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               263-505
               

               Cow position:
               chr5:20956997-20957238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               265-506
               

               Cow position:
               chr5:71595070-71595311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               269-435
               

               Cow position:
               chr5:69560102-69559934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               274-506
               

               Cow position:
               chr5:12177537-12177774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               281-494
               

               Cow position:
               chr5:21782741-21782959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 172
               

               Conread position:
               281-506
               

               Cow position:
               chr5:35448821-35448592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 185
               

               Conread position:
               282-494
               

               Cow position:
               chr5:35612331-35612549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               283-503
               

               Cow position:
               chr5:5727946-5727722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               295-461
               

               Cow position:
               chr5:47761361-47761189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.