Cow genome map


           Conread name:
           rret35_i21.y1
        

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               215, 116
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 102
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 162
               

               Conread position:
               2-281
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 56
               

               Conread position:
               4-262
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               4-262
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 165
               

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 118
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 77
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 111
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               215, 18
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               126, 91
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               215, 65
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               158, 108
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               164, 80
               

               Conread position:
               4-281
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 279
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 34
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               210, 84
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 162
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 173
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 271
               

               Conread position:
               4-295
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 23
               

               Conread position:
               5-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               8-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 161
               

               Conread position:
               9-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 271
               

               Conread position:
               12-273
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               12-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               14-276
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               15-276
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 102
               

               Conread position:
               18-276
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               18-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               196, 112
               

               Conread position:
               18-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 143
               

               Conread position:
               19-283
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               195, 69
               

               Conread position:
               21-286
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 90
               

               Conread position:
               24-283
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               167, 8
               

               Conread position:
               30-281
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 20
               

               Conread position:
               36-266
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               178, 11
               

               Conread position:
               37-280
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               78, 153
               

               Conread position:
               53-283
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               163, 5
               

               Conread position:
               56-262
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               158, 69
               

               Conread position:
               64-283
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               152, 53
               

               Conread position:
               72-274
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               142, 61
               

               Conread position:
               79-283
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               84-283
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               130, 186
               

               Conread position:
               89-270
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               92-276
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               93-243
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               109-283
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 55
               

               Conread position:
               110-283
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               105, 36
               

               Conread position:
               124-283
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 140
               

               Conread position:
               125-275
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               126-283
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               127-262
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               133-266
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               134-283
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 136
               
Show alignments to all cow chromosomes.