Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 4-258 |
| Cow position: | chr12:24755449-24755190 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 7 |
| Conread position: | 4-273 |
| Cow position: | chr12:5273545-5273269 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 4-281 |
| Cow position: | chr12:7108753-7109045 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 279 |
| Conread position: | 4-283 |
| Cow position: | chr12:2711062-2711352 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 4-283 |
| Cow position: | chr12:11582980-11583256 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 129 |
| Conread position: | 4-283 |
| Cow position: | chr12:32786407-32786144 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 4-283 |
| Cow position: | chr12:37123091-37123367 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 7 |
| Conread position: | 5-262 |
| Cow position: | chr12:42966575-42966839 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 160 |
| Conread position: | 18-262 |
| Cow position: | chr12:17472627-17472385 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 20 |
| Conread position: | 24-276 |
| Cow position: | chr12:19420337-19420083 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 43 |
| Conread position: | 24-283 |
| Cow position: | chr12:26869201-26868938 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 13 |
| Conread position: | 34-274 |
| Cow position: | chr12:13965168-13964919 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 152 |
| Conread position: | 37-274 |
| Cow position: | chr12:30437858-30438096 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 127 |
| Conread position: | 87-286 |
| Cow position: | chr12:18572294-18572503 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 203 |
| Conread position: | 97-283 |
| Cow position: | chr12:46143489-46143680 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 23 |
| Conread position: | 103-293 |
| Cow position: | chr12:22261141-22260956 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 115-281 |
| Cow position: | chr12:12017559-12017734 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 164 |
| Conread position: | 118-286 |
| Cow position: | chr12:17495504-17495330 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 168 |
| Conread position: | 129-276 |
| Cow position: | chr12:4866515-4866667 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 34 |
| Conread position: | 129-286 |
| Cow position: | chr12:36954676-36954513 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 157 |
| Conread position: | 133-279 |
| Cow position: | chr12:19715324-19715179 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 143-283 |
| Cow position: | chr12:23154753-23154604 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 21 |
Show alignments to all cow chromosomes.