Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-274 |
| Cow position: | chr13:20175115-20174846 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 1-283 |
| Cow position: | chr13:60508747-60509030 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 100 |
| Conread position: | 2-277 |
| Cow position: | chr13:21988730-21989013 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 115 |
| Conread position: | 4-273 |
| Cow position: | chr13:60429709-60429977 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 33 |
| Conread position: | 4-276 |
| Cow position: | chr13:25882853-25883132 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 202, 160 |
| Conread position: | 4-278 |
| Cow position: | chr13:34052229-34052509 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 4-283 |
| Cow position: | chr13:2414396-2414119 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 122, 7 |
| Conread position: | 4-283 |
| Cow position: | chr13:3003817-3003532 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 120 |
| Conread position: | 4-283 |
| Cow position: | chr13:7663058-7663333 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 33 |
| Conread position: | 4-283 |
| Cow position: | chr13:20879463-20879742 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 4-286 |
| Cow position: | chr13:60974438-60974168 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 63 |
| Conread position: | 4-289 |
| Cow position: | chr13:25927180-25926873 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 11-266 |
| Cow position: | chr13:20683757-20684017 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 18-283 |
| Cow position: | chr13:19178632-19178365 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 105 |
| Conread position: | 18-283 |
| Cow position: | chr13:21276215-21275945 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 258 |
| Conread position: | 37-275 |
| Cow position: | chr13:1638546-1638783 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 177, 39 |
| Conread position: | 40-271 |
| Cow position: | chr13:33517571-33517825 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 40-274 |
| Cow position: | chr13:28140203-28140447 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 166, 90 |
| Conread position: | 40-284 |
| Cow position: | chr13:48627079-48626835 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 174, 75 |
| Conread position: | 41-275 |
| Cow position: | chr13:6178011-6178252 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 158, 73 |
| Conread position: | 51-283 |
| Cow position: | chr13:21039277-21039509 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 59-282 |
| Cow position: | chr13:26479899-26480121 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 58 |
| Conread position: | 63-283 |
| Cow position: | chr13:20270907-20271127 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 151, 48 |
| Conread position: | 73-272 |
| Cow position: | chr13:32283423-32283222 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 22 |
| Conread position: | 124-283 |
| Cow position: | chr13:23166844-23167006 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 127-277 |
| Cow position: | chr13:26261544-26261705 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 127-281 |
| Cow position: | chr13:1780085-1779922 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 129-283 |
| Cow position: | chr13:15974858-15974703 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 142 |
| Conread position: | 133-283 |
| Cow position: | chr13:5278944-5279096 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 139 |
| Conread position: | 143-283 |
| Cow position: | chr13:20536733-20536591 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 7 |
Show alignments to all cow chromosomes.