Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-273 |
| Cow position: | chr15:17196624-17196342 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 24 |
| Conread position: | 1-286 |
| Cow position: | chr15:17260684-17260971 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 213, 120 |
| Conread position: | 2-262 |
| Cow position: | chr15:13669426-13669691 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 86 |
| Conread position: | 2-275 |
| Cow position: | chr15:15707640-15707912 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 134 |
| Conread position: | 2-283 |
| Cow position: | chr15:29542476-29542185 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 162 |
| Conread position: | 4-262 |
| Cow position: | chr15:6906029-6905749 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 4-271 |
| Cow position: | chr15:22168540-22168261 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 4-273 |
| Cow position: | chr15:18206042-18206311 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 167, 18 |
| Conread position: | 4-273 |
| Cow position: | chr15:47842791-47843056 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 210, 31 |
| Conread position: | 4-274 |
| Cow position: | chr15:19054726-19054448 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 203, 160 |
| Conread position: | 4-279 |
| Cow position: | chr15:45245078-45245351 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 210, 31 |
| Conread position: | 4-283 |
| Cow position: | chr15:7430459-7430171 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 82, 127 |
| Conread position: | 4-283 |
| Cow position: | chr15:19403452-19403175 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 123 |
| Conread position: | 4-283 |
| Cow position: | chr15:33976216-33976494 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 267 |
| Conread position: | 4-287 |
| Cow position: | chr15:12836852-12837127 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 121, 68 |
| Conread position: | 14-283 |
| Cow position: | chr15:23798055-23798335 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 109 |
| Conread position: | 27-273 |
| Cow position: | chr15:32204453-32204698 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 146, 81 |
| Conread position: | 40-283 |
| Cow position: | chr15:22751889-22751644 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 174, 73 |
| Conread position: | 63-283 |
| Cow position: | chr15:4485562-4485335 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 111, 215 |
| Conread position: | 64-273 |
| Cow position: | chr15:27281279-27281069 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 150, 85 |
| Conread position: | 71-273 |
| Cow position: | chr15:28150657-28150444 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 72-276 |
| Cow position: | chr15:34176053-34176263 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 81-283 |
| Cow position: | chr15:52739725-52739930 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 133, 7 |
| Conread position: | 97-283 |
| Cow position: | chr15:6045931-6046122 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 111-273 |
| Cow position: | chr15:24941016-24941175 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 111-274 |
| Cow position: | chr15:16449074-16448910 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 125-283 |
| Cow position: | chr15:17100360-17100516 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 127-273 |
| Cow position: | chr15:12316278-12316125 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 127-283 |
| Cow position: | chr15:241202-241036 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 127-283 |
| Cow position: | chr15:1298090-1297931 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 127-283 |
| Cow position: | chr15:27972861-27973023 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 149 |
| Conread position: | 127-286 |
| Cow position: | chr15:41619832-41619998 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 160 |
| Conread position: | 127-287 |
| Cow position: | chr15:2952776-2952941 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 133-283 |
| Cow position: | chr15:35642368-35642213 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 142 |
| Conread position: | 134-273 |
| Cow position: | chr15:22137030-22136883 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.