Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-271 |
| Cow position: | chr18:4315877-4316164 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 1-283 |
| Cow position: | chr18:7946952-7947250 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 200, 283 |
| Conread position: | 1-283 |
| Cow position: | chr18:33793280-33793569 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 274 |
| Conread position: | 3-262 |
| Cow position: | chr18:15172624-15172877 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 213, 33 |
| Conread position: | 4-249 |
| Cow position: | chr18:40758792-40759047 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 4-273 |
| Cow position: | chr18:32218673-32218397 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 210, 7 |
| Conread position: | 4-273 |
| Cow position: | chr18:37691016-37690755 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 210, 18 |
| Conread position: | 4-276 |
| Cow position: | chr18:11322169-11322455 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 4-282 |
| Cow position: | chr18:43284171-43283896 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 115 |
| Conread position: | 4-283 |
| Cow position: | chr18:33606211-33606493 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 4-283 |
| Cow position: | chr18:34621784-34621498 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 160 |
| Conread position: | 4-283 |
| Cow position: | chr18:42747167-42747458 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 169 |
| Conread position: | 5-271 |
| Cow position: | chr18:23765421-23765147 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 201, 54 |
| Conread position: | 12-295 |
| Cow position: | chr18:14586894-14586591 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 15-281 |
| Cow position: | chr18:31003183-31002917 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 185, 110 |
| Conread position: | 17-259 |
| Cow position: | chr18:17380182-17380411 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 197, 28 |
| Conread position: | 31-273 |
| Cow position: | chr18:39662384-39662634 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 94, 182 |
| Conread position: | 37-273 |
| Cow position: | chr18:49665544-49665300 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 50-273 |
| Cow position: | chr18:16227185-16227421 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 73-259 |
| Cow position: | chr18:56181806-56181617 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 90-276 |
| Cow position: | chr18:43065178-43065373 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 94-295 |
| Cow position: | chr18:11233101-11233307 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 119, 180 |
| Conread position: | 108-283 |
| Cow position: | chr18:1733507-1733331 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 106, 56 |
| Conread position: | 112-273 |
| Cow position: | chr18:5991184-5991357 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 112-273 |
| Cow position: | chr18:54572610-54572437 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 125-283 |
| Cow position: | chr18:4649034-4648879 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 127-283 |
| Cow position: | chr18:3115163-3115325 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 127-283 |
| Cow position: | chr18:13359765-13359927 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 128-283 |
| Cow position: | chr18:56159169-56159323 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 55 |
| Conread position: | 134-262 |
| Cow position: | chr18:18445399-18445271 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 89, 32 |
Show alignments to all cow chromosomes.