Cow genome map
| Conread name: | rret35_i21.y1 |
| Conread position: | 1-272 |
| Cow position: | chr19:12375446-12375160 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 2-262 |
| Cow position: | chr19:42240690-42240425 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 85 |
| Conread position: | 2-273 |
| Cow position: | chr19:24956829-24956566 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 100 |
| Conread position: | 2-282 |
| Cow position: | chr19:2589115-2589391 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 3-283 |
| Cow position: | chr19:1580972-1580697 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 11 |
| Conread position: | 4-253 |
| Cow position: | chr19:52214694-52214945 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 212, 114 |
| Conread position: | 4-262 |
| Cow position: | chr19:4448142-4448399 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 210, 44 |
| Conread position: | 4-262 |
| Cow position: | chr19:11817328-11817064 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 72 |
| Conread position: | 4-272 |
| Cow position: | chr19:14253236-14253514 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 84 |
| Conread position: | 4-272 |
| Cow position: | chr19:39697674-39697947 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 162 |
| Conread position: | 4-276 |
| Cow position: | chr19:6688404-6688121 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 4-283 |
| Cow position: | chr19:27104357-27104631 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 34 |
| Conread position: | 5-272 |
| Cow position: | chr19:29627764-29627503 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 80 |
| Conread position: | 7-283 |
| Cow position: | chr19:21114908-21115192 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 271 |
| Conread position: | 13-273 |
| Cow position: | chr19:930761-931031 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 194, 106 |
| Conread position: | 39-262 |
| Cow position: | chr19:19673055-19673279 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 175, 125 |
| Conread position: | 47-281 |
| Cow position: | chr19:31594943-31595183 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 227 |
| Conread position: | 50-277 |
| Cow position: | chr19:43058179-43058417 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 52-271 |
| Cow position: | chr19:8770894-8771124 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 59-283 |
| Cow position: | chr19:46454506-46454737 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 66-273 |
| Cow position: | chr19:29755243-29755030 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 148, 12 |
| Conread position: | 79-273 |
| Cow position: | chr19:9537351-9537552 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 97-262 |
| Cow position: | chr19:35741851-35742028 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 125-272 |
| Cow position: | chr19:7492161-7492311 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 125-283 |
| Cow position: | chr19:19430953-19431117 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 127-262 |
| Cow position: | chr19:4537688-4537551 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 135-289 |
| Cow position: | chr19:33882425-33882269 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 136-283 |
| Cow position: | chr19:10093028-10093177 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 137-262 |
| Cow position: | chr19:52381266-52381396 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 60 |
Show alignments to all cow chromosomes.