Cow genome map


           Conread name:
           rret35_i21.y1
        

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 151
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 185
               

               Conread position:
               2-262
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               125, 136
               

               Conread position:
               2-273
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 35
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               142, 108
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 28
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               4-279
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               210, 68
               

               Conread position:
               4-281
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 163
               

               Conread position:
               4-282
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 275
               

               Conread position:
               4-282
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 280
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 40
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 33
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 7
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 147
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 168
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 285
               

               Conread position:
               5-262
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               5-262
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               209, 123
               

               Conread position:
               5-262
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 109
               

               Conread position:
               5-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 19
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 121
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               210, 17
               

               Conread position:
               11-269
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               203, 6
               

               Conread position:
               11-289
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               156, 135
               

               Conread position:
               12-272
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               12-273
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 151
               

               Conread position:
               13-280
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 153
               

               Conread position:
               17-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               24-283
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               184, 93
               

               Conread position:
               31-262
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               37-272
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               169, 51
               

               Conread position:
               45-286
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               169, 69
               

               Conread position:
               47-283
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               167, 70
               

               Conread position:
               52-283
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               162, 90
               

               Conread position:
               54-283
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               160, 128
               

               Conread position:
               56-272
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 6
               

               Conread position:
               65-281
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               92-275
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               103-276
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               112-283
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               115-262
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               121-273
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               125-272
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               125-282
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               89, 149
               

               Conread position:
               131-274
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               134-283
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               154-283
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 10
               
Show alignments to all cow chromosomes.