Cow genome map

Conread name: rret35_i21.y1

Conread position: 1-276
Cow position: chr20:13652711-13652424 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 121, 71

Conread position: 2-273
Cow position: chr20:31261392-31261655 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 31

Conread position: 2-286
Cow position: chr20:40423438-40423147 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 163

Conread position: 4-272
Cow position: chr20:23065182-23064899 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 4-273
Cow position: chr20:14756412-14756137 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 160

Conread position: 4-276
Cow position: chr20:10178440-10178172 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 155, 19

Conread position: 4-281
Cow position: chr20:9536792-9537072 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 110

Conread position: 4-283
Cow position: chr20:12839713-12839998 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 133

Conread position: 4-283
Cow position: chr20:33170216-33169934 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 113

Conread position: 4-283
Cow position: chr20:41119578-41119849 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 210, 107

Conread position: 4-286
Cow position: chr20:13493393-13493677 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 7

Conread position: 4-286
Cow position: chr20:17903814-17904102 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 120

Conread position: 5-262
Cow position: chr20:19313410-19313141 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 133

Conread position: 5-271
Cow position: chr20:14210505-14210226 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 165

Conread position: 5-273
Cow position: chr20:6549812-6549547 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 209, 118

Conread position: 5-273
Cow position: chr20:11453700-11453424 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 161

Conread position: 5-273
Cow position: chr20:18185234-18185500 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 210

Conread position: 5-276
Cow position: chr20:5077853-5078122 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 96

Conread position: 5-281
Cow position: chr20:35145662-35145952 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 6-278
Cow position: chr20:3599733-3599455 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 19

Conread position: 8-286
Cow position: chr20:22959684-22959399 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 82

Conread position: 10-283
Cow position: chr20:40256646-40256908 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 206, 80

Conread position: 25-273
Cow position: chr20:9126413-9126666 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 189, 92

Conread position: 28-262
Cow position: chr20:31069321-31069554 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 186, 133

Conread position: 30-276
Cow position: chr20:17251392-17251643 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 130

Conread position: 30-283
Cow position: chr20:6054822-6054578 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 18

Conread position: 32-278
Cow position: chr20:4781235-4781501 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 256

Conread position: 37-271
Cow position: chr20:35158672-35158431 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 169, 51

Conread position: 37-283
Cow position: chr20:24002017-24002256 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 80

Conread position: 43-272
Cow position: chr20:3034791-3035028 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 74

Conread position: 58-283
Cow position: chr20:16291188-16291414 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 113, 66

Conread position: 88-273
Cow position: chr20:24521490-24521682 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 158
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 0

Conread position: 99-283
Cow position: chr20:22235062-22235252 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 179

Conread position: 109-273
Cow position: chr20:20312977-20312815 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 110-286
Cow position: chr20:10200102-10200290 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 182

Conread position: 131-283
Cow position: chr20:13023696-13023537 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 135-277
Cow position: chr20:9379195-9379344 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.