Cow genome map


           Conread name:
           rret35_i21.y1
        

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               2-273
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 31
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 163
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 160
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               155, 19
               

               Conread position:
               4-281
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 110
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 133
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 113
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               210, 107
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 7
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 120
               

               Conread position:
               5-262
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 133
               

               Conread position:
               5-271
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 165
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               209, 118
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 161
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 210
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 96
               

               Conread position:
               5-281
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               6-278
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 82
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               206, 80
               

               Conread position:
               25-273
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               189, 92
               

               Conread position:
               28-262
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               186, 133
               

               Conread position:
               30-276
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 130
               

               Conread position:
               30-283
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 18
               

               Conread position:
               32-278
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 256
               

               Conread position:
               37-271
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               169, 51
               

               Conread position:
               37-283
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 80
               

               Conread position:
               43-272
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 74
               

               Conread position:
               58-283
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               88-273
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               99-283
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               26, 179
               

               Conread position:
               109-273
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               110-286
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               56, 182
               

               Conread position:
               131-283
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               135-277
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 0
               
Show alignments to all cow chromosomes.