Cow genome map
Conread name: | rret35_i21.y1 |
Conread position: | 1-276 |
Cow position: | chr20:13652711-13652424 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 201 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 121, 71 |
Conread position: | 2-273 |
Cow position: | chr20:31261392-31261655 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 31 |
Conread position: | 2-286 |
Cow position: | chr20:40423438-40423147 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 163 |
Conread position: | 4-272 |
Cow position: | chr20:23065182-23064899 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 4-273 |
Cow position: | chr20:14756412-14756137 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 160 |
Conread position: | 4-276 |
Cow position: | chr20:10178440-10178172 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 215 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 155, 19 |
Conread position: | 4-281 |
Cow position: | chr20:9536792-9537072 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 110 |
Conread position: | 4-283 |
Cow position: | chr20:12839713-12839998 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 133 |
Conread position: | 4-283 |
Cow position: | chr20:33170216-33169934 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 113 |
Conread position: | 4-283 |
Cow position: | chr20:41119578-41119849 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 206 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 210, 107 |
Conread position: | 4-286 |
Cow position: | chr20:13493393-13493677 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 7 |
Conread position: | 4-286 |
Cow position: | chr20:17903814-17904102 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 120 |
Conread position: | 5-262 |
Cow position: | chr20:19313410-19313141 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 133 |
Conread position: | 5-271 |
Cow position: | chr20:14210505-14210226 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 196 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 114, 165 |
Conread position: | 5-273 |
Cow position: | chr20:6549812-6549547 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 193 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 209, 118 |
Conread position: | 5-273 |
Cow position: | chr20:11453700-11453424 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 161 |
Conread position: | 5-273 |
Cow position: | chr20:18185234-18185500 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 210 |
Conread position: | 5-276 |
Cow position: | chr20:5077853-5078122 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 96 |
Conread position: | 5-281 |
Cow position: | chr20:35145662-35145952 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 6-278 |
Cow position: | chr20:3599733-3599455 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 19 |
Conread position: | 8-286 |
Cow position: | chr20:22959684-22959399 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 82 |
Conread position: | 10-283 |
Cow position: | chr20:40256646-40256908 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 198 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 206, 80 |
Conread position: | 25-273 |
Cow position: | chr20:9126413-9126666 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 189, 92 |
Conread position: | 28-262 |
Cow position: | chr20:31069321-31069554 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 186, 133 |
Conread position: | 30-276 |
Cow position: | chr20:17251392-17251643 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 130 |
Conread position: | 30-283 |
Cow position: | chr20:6054822-6054578 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 18 |
Conread position: | 32-278 |
Cow position: | chr20:4781235-4781501 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 189 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 40, 256 |
Conread position: | 37-271 |
Cow position: | chr20:35158672-35158431 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 179 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 169, 51 |
Conread position: | 37-283 |
Cow position: | chr20:24002017-24002256 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 80 |
Conread position: | 43-272 |
Cow position: | chr20:3034791-3035028 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 74 |
Conread position: | 58-283 |
Cow position: | chr20:16291188-16291414 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 88-273 |
Cow position: | chr20:24521490-24521682 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 158 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 99-283 |
Cow position: | chr20:22235062-22235252 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 152 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 26, 179 |
Conread position: | 109-273 |
Cow position: | chr20:20312977-20312815 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 129 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 110-286 |
Cow position: | chr20:10200102-10200290 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 142 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 56, 182 |
Conread position: | 131-283 |
Cow position: | chr20:13023696-13023537 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 135-277 |
Cow position: | chr20:9379195-9379344 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.